Pseudomonas cichorii: PCH70_08060
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Entry
PCH70_08060 CDS
T03002
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
Organism
pci
Pseudomonas cichorii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA_2
AAA_16
Mg_chelatase
AAA
HTH_11
HTH_23
HTH_AsnC-type
AAA_22
HTH_8
RWP-RK
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AHF65959
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Position
complement(894953..896380)
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AA seq
475 aa
AA seq
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MPHILIVEDETIIRSALRRLLERNQYEVSEAGSVPEAQERFNIPSFDLIVSDLRLPGAPG
TELIKLGEGKPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQTSS
NQQAERNAPAKANSADKGAAQNGEIGIIGSCPPMLDLYSKIRKVAPTDSNVLVQGESGTG
KELVARALHNLSRRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADG
GTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKNGEF
REDLYYRLHVIALKLPALRERGNDVLEIARAFLARQSAKAGRNDLKFAPDAEQAIRHYSW
PGNVRELENAVERSVILCENPEISADLLGIDIELDGLNDDEYMGLAPLPASANSTNSEPT
EDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKGVANET
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatattttgatcgtcgaagacgaaaccattatccgctcggccctgcgccgtctg
cttgagcgtaaccagtacgaagtcagcgaggcaggttcggtacccgaggctcaggagcgt
ttcaacatcccctcgttcgacctgatcgtcagcgacctgcgactgcctggcgctcctggc
accgaactgatcaagctcggtgaaggcaagcctgtactgatcatgaccagctatgccagc
ctgcgctcggccgtggactccatgaaaatgggcgcggtggattacatcgccaaacccttt
gaccacgatgaaatgctgcaggctgttgcgcgcatcctgcgtgatcgtcagaccagctca
aaccagcaggccgaacgcaacgcgcccgccaaagccaacagcgccgacaagggcgctgcg
cagaacggcgagatcggcatcatcggctcctgcccgcccatgctcgatctctacagcaag
attcgtaaagtcgcgcccacagattccaacgttctggtccagggcgaatccgggaccggc
aaggaactggtcgcccgcgcactgcataatctgtcgcgtcgcgccaaggcaccgatgatc
tccgtgaactgcgcagcgattcccgaatccctgatcgagtccgagctgttcggccatgaa
aaaggtgcctttaccggtgccagcgcaggtcgcgcaggtctggttgaagcggccgatggc
ggcactctgtttctcgacgaaatcggagaactgcctctggaagcacaggccaggctcctg
cgcgtcctgcaggaaggcgagattcgtcgcgtcggctccgtgcagtcacagaaagtcgat
gtacgcctgatcgccgcgacccaccgggacctcaagaccctggccaagaatggcgagttt
cgcgaagacctttattaccgtctgcacgtgatcgcgctgaaactgcctgcattgcgcgaa
cgcggtaacgacgtgctcgaaatcgcccgcgcctttctggctcgccaaagcgccaaagct
ggccgcaacgatctgaagtttgcccccgacgccgaacaggccatccgtcattacagctgg
ccgggtaacgtgcgggagctggaaaacgccgtggaacgctcggtgattctgtgcgagaac
ccggaaatctctgccgacctgctgggtatagacatcgagctcgacggtctgaacgacgac
gagtacatgggcctggcgcccctgcccgcctcggcgaactcgaccaacagcgagcccacc
gaagacctgtcactggaagactacttccagcacttcgtcctggaacatcaggatcacatg
acagagaccgaactggcacgcaaactgggcgtcagccgcaagtgcctgtgggaacgccgt
cagcgactgggcattccgcgccgcaaaggggtcgccaacgaaacctga
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