Pseudomonas cichorii: PCH70_25670
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Entry
PCH70_25670 CDS
T03002
Name
(GenBank) type VI secretion protein, VC_A0114 family
KO
K11893
type VI secretion system protein ImpJ
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_25670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pci02044
]
PCH70_25670
Secretion system [BR:
pci02044
]
Type VI secretion system
Imp/Vas secretion system core components
PCH70_25670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AHF67720
LinkDB
All DBs
Position
complement(2997720..2999051)
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AA seq
443 aa
AA seq
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MNSHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTKLLGSYTWGFLNLDIDLQFLNMGKLV
VSQASGILPDGSLFELGGNTEPLALDVPPNTGNTPVYLALPLVTGNHIEARRPEQSDVLA
RYTAYEAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICEVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIADRIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSSDSKRPRLDSRYQHSDQGASFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHTLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcataaagtcatttggcaggaaggcatgttgctgcgtccgcagcacttccag
cacaacgatcgctactacgatcaccagatgaagacccgcaccaagctgctgggcagctac
acctggggcttcctcaatctggacatcgacctgcagttcctcaatatgggcaagctggtg
gtcagtcaggcctcggggattctgccggacggcagcctgttcgagctgggcggcaacacg
gagccgctggctctcgacgtgccacccaataccggtaatacaccggtctatctggcactg
ccgctggtgaccggcaatcacatcgaggctcgtcgtccggagcagtccgacgtgctggcg
cgctataccgcgtacgaagccgaagtggccgactccaatgccggcgacgactccgccagt
caggtcagctgtggtcgtcccgatttcaaactgttgctcggcgagcagcagagcgatcag
gcctacgtgaagctgaagatctgcgaagtgctcgatacgacgccggacggcgtgatcagc
ctcgacccggactttgtgccgacttacatccaggcgcacgcttccagctacctgctgtca
tgcctcaaggaagtcatcagcatgctcagccaccggggcgacaccatcgccgaccggatt
cgctccaacggcaaggtgggtggcgctgaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgagctgctgctgcgtcactatctgggcctggagcaggttcacccggaagaa
ctgtaccgcacgctgctgaccatgcttggcgatctggcgaccttttccagtgacagcaaa
cgcccacgcctggacagccgttatcagcacagcgaccagggcgcgagcttccgcaaactg
atggaggcgatccgccaggtgttgtcgatggtgctggagcagcatgccatcgagttgatt
ctgcaggcgcgccagtacggcatcattgtctcgccgctgcacgatcacactctgctgggc
tcagcctcgttcgtgctggcggccagtgccaactgcgattccgaagagctgcgtcatcgc
ttgcccgcgcacctcaaggtcggcccggtggagcgtatccgccaactggtcaacctgcac
ctgccaggcatcaaggtcaaacccttgccggtggccccgcggcagatcgcgttccactcc
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggcttcgcgttccatgtatccggcgaattcgccgagcttgaactgaaattctgggcc
ataaggaactga
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