Pseudomonas cichorii: PCH70_25730
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Entry
PCH70_25730 CDS
T03002
Name
(GenBank) type VI secretion protein, VC_A0111 family
KO
K11895
type VI secretion system protein ImpH
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_25730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pci02044
]
PCH70_25730
Secretion system [BR:
pci02044
]
Type VI secretion system
Imp/Vas secretion system core components
PCH70_25730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
AHF67726
LinkDB
All DBs
Position
complement(3005198..3006205)
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AA seq
335 aa
AA seq
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MDTTYGPSAPALSGLTRSIREYSLFQAVLLVIDRLREAHPYLSEDDLYDQLEFQANPSLG
FPGSDVDRVEFFEEHGQMRARMRFNLIGLVGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWKKYRYRASFESGAVDAFSSHLFALIGLGGEEIRRAKELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHAELTIEQCIERRVEILDEQRNRLGCANSMLGEDLVLG
EHVRDRSGKFRIHIRELDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGREKADGVVTLGSKTH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgtatgggccttcagcccctgctttaagcgggctgacccgaagtatacga
gagtactcgctgtttcaggccgtgctgctggtcatcgaccggctgcgcgaggcgcacccg
tacctgagcgaggacgacctgtacgaccagctggaattccaggccaacccgagcctgggt
ttccctggcagtgacgttgatcgcgtggagttttttgaagagcacgggcaaatgcgagcg
cgcatgcgcttcaacctgatcggtctggtgggttccggttcgccgctgcctgcgttttat
ggcgaacaggcgctgggcgacagcgaggacggcaacccgacccgcaatttcctcgatctg
tttcaccatcgtctgcaacggctgatgctgccgatctggaaaaaataccgctatcgggcc
agcttcgaaagcggcgcggtcgatgcgttttcttcgcatcttttcgccctgatcggcctt
ggtggtgaagagatccggcgcgccaaggaactgaactggaagcgcctgctgccatatctg
ggcttgctcagcctgcgtgctcactcggcagcattgatcgaagcggtgctgcgttactac
ttcaagcacgccgaactgaccatcgagcagtgcatcgagcgtcgggtggaaattctcgac
gagcagcgcaatcgtctgggttgcgccaacagcatgctcggggaagacctggtgctgggt
gaacatgtacgcgaccgcagcggcaagttccgcattcacattcgcgagctcgactggcag
cgctttcacgagttcctgccaatcggtttcggctaccagccgctgtgcgcgctggtgcgg
ttcaccttgcgtgacccgcttgattacgacattcgcctggtactgcgccaggaagaaata
cgcgaactgcgcatcggtgaacaaaacgcctgtcgcctgggatggaccagttggctcggc
cgcgaaaaagcggacggtgtggtaaccctgggcagcaaaactcattaa
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