Pseudomonas cichorii: PCH70_40770
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Entry
PCH70_40770 CDS
T03002
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCH70_40770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_40770
Enzymes [BR:
pci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PCH70_40770
DNA repair and recombination proteins [BR:
pci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCH70_40770
Prokaryotic type
PCH70_40770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHF69230
LinkDB
All DBs
Position
complement(4755608..4756306)
Genome browser
AA seq
232 aa
AA seq
DB search
MTMTSDDRIKLEPSWKQALRDEFEKPYMSQLREFLRQEHVEGKEIYPPGPLIFNALNSTP
LDQVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIFKELKRDLNIDIPNHGCLQA
WADQGVLMLNTTLTVQRANAASHAGKGWQHFTDKVIEVVSAHQPNLVFLLWGSHAQSKQK
LVDATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGLAPIDWRLSDI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacaagcgatgaccgtatcaaacttgagcccagctggaagcaggcgctgcgc
gatgagtttgaaaaaccttacatgtcgcaactgcgtgagttcctgcgccaggaacatgtc
gaaggcaaggaaatctatccgccggggccgctgatcttcaatgcgctcaactcgacgccg
ctggatcaggtgaaagtcgtgattctcggccaggacccgtatcacggcccgggtcaggcc
catggcttgtgtttttcggtacaacccggcgtgcctgcgccgccttcgctggtgaatatc
ttcaaggagttgaagcgcgacttgaacattgatatccccaaccacggctgcctgcaagcc
tgggccgatcagggcgtgctgatgctcaacaccaccctgactgtgcagcgggccaatgcg
gcttctcatgctggcaagggctggcagcatttcaccgacaaggtcatcgaagtcgtcagc
gcccatcagccgaatctggtcttcctgttgtggggttcccatgcgcagagcaagcagaag
ctggtggacgccaccaagcatctggtactgacttcggttcacccgtcgccgttgtcggcc
tataaaggcttcctgggtaacgggcattttggtcgcgccaacaagtatctggagcagaat
gggctggcgccgattgattggaggctgtcggatatttga
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