Prosopis cineraria: 129307006
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Entry
129307006 CDS
T09047
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcin03036
]
129307006
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
129307006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
PHD_2
zf-RING_15
Motif
Other DBs
NCBI-GeneID:
129307006
NCBI-ProteinID:
XP_054803823
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MSFPGSSATAVFSPRGISLSNTIHSEVASCLPLPSLPVFCGASDHDFRLLEGSRFLDRGE
VLAQSGKIAELLQQTDVSYLNLRDDAKAAPCVYVEPLELHAEVLRCNPEAFECGTAGPLK
EQISGSVIPEKRLFESNLSHAGQTQKDYNATQNHQPLNFSTNDISMLSSKKSKVKKKGGD
GISAGSDSTEIQGAIIGKFCEFLEDLCSKAELLSEDRDEAEWLPLSLSDLRKLVNEIVSI
RAKKLLHLVPVEILVRLLKVLDHQIHRAEGLSIDECDNSDSEVVSSILSALESIHAALAV
MAHTEMPKQLYKEEIIERILEFARHQILDVMCACDPSYRALHRPNENIEFEGDDYEDYDI
EFGSANKKRRTSKTSKLRKPASSKVSTAVNTILQKLCTVVGLLKDLLLIERLSDSCILQL
VKTSITTFLVDNIQLLQLKAISLVSGIFYLYVQHRTYVIDEMLQLLWKLPNSKRALRAYH
LRDEEQRQIQMVTALLIQLIQCSANLPDNLRQASSGSAVLEVSIDSSYPTKCNEAATEAC
CLFWSRVLQRFASVKAQDASEVKLIMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNA
GLKSKDISARSLAIDILGTIAARLKRDAVICSRDKFWVLQYLLSEDDATENYSEDMCCVC
MGGRAENLLICNVCQKLFHPDCLGIKEHEISNRNWCCQICICQKQLLVLQSYCKSQYKDG
VSKSKLSKDDSGPFGQIAKVEIVQQLLLNYLQDVASTDDLHLFICWFYLCLWYKDDLSCQ
QKSIYYLARLKSRIIVRDSMTVSSILSRDSIKRITLAVGQNSSFCRGFDKILHMLLASLR
ENSPVVRAKALRAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASH
PDVGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCISNASFSGFTRACTEIISRVSDDESS
IQDLVCKTFYEFWFEEPSGLQAQVYGDGSSVPLEVAKKTEQIVEMLRRMPNHQLLVTVIK
RNLSLDFLPQSAKAIGVNPVSLTTVRKRCELMCKCLLEKILQVEEANSYEVELHAVPYVL
VLHAFCLVDPTLCAPASNPSQFVVTLQPYLKSQVDNRMVAQLLESIIFIIDAVLPLIRKL
PQSIIEELEQDLKQMIVRHSFLTVVHACIKCLCSVSKIAGKGAAVVEHLIQVFFKRLDTQ
AVENNQQVGRSLFCLGLLIRYGSCLLSSSGNKNIDVRKSLSLFTRYLSVEDFVVKVRSLQ
ALGFVLIARPEYMLEKDIGKILEGTFSSVVDTRLKIQALQNMFEYLLDAEGQMGTDNASH
NVSNLSVGAGQSVPVAAGAGDTNICGGIIQLYWDNILGRCLDFNEQVRQSALKIVEVVLR
QGLVHPITCVPYLIALETDPQESNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFMQS
ICVSPENSNHKVQSMIPISGKGKSETDSLTQARLGVSRIYKLIRGNRISRNKFMSSIVRK
FDNPTWSKSVIAFLTYCTEVLGLLPFTSPDEPLYLIYAINRIVQVRMGPLEANFKAWNSR
FSRRDCQSTTYGNGICQLGPNEPTLTTQVMPVDLNGAFYHNMDDQPSSNGMRSVDLNGTI
QQQPCDASSNNGSLELHEDFSSFCGISDDDMEKIQADCLSGIALQLLLKLKRHLKIMYSL
NDARCQAYNPAEPPKPEVLSRQNIAFNINECHFSLPATPQELLQRYQEFKNALKEDTVDY
SLYTANIKRKRPTPRKVRKSGYMTGAGGDDDEEDDDEDWTGGIRKLNSSGRKVNLRSSRQ
Y
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgagttttccagggagttctgccacggcggtgtttagcccccgtggcatcagtttgtcg
aacactatccattcggaggtcgcatcttgcttgcccttgccgtcgcttccggtgttctgc
ggagcttccgatcatgacttccggctcctggagggatctaggttcctggaccgcggtgaa
gtgcttgcacagtccggtaagattgctgagttgcttcagcagacggatgtgtcgtacttg
aatctaagagatgacgcgaaggctgctccctgtgtctatgttgaacctttagaacttcat
gccgaagttctaaggtgcaatcctgaagcatttgaatgtggtactgcaggtcctcttaag
gagcagatctctggtagtgtaatacctgaaaagaggctttttgaatcaaacctttctcat
gctggtcagacacagaaagactacaatgcaacccaaaatcaccagcctcttaatttttct
acaaatgatatttctatgttgtcttcaaaaaaatctaaagtcaagaaaaaaggtggagat
ggtatatctgccggatctgattctactgagattcaaggtgccatcattgggaagttttgt
gagtttctggaggacttgtgcagcaaagctgaacttcttagtgaggatcgtgatgaagca
gagtggttgccattgtcactttctgatcttagaaagcttgttaatgaaatagtgtctata
cgtgcaaagaaacttctccatttggttcctgtagagatccttgttagattactgaaggtc
ttagaccatcaaatacatcgagcagaaggcctgtcaattgatgaatgtgataattcagat
tctgaagtagtttcatcaattttaagtgctttggagtccattcatgcagcacttgcggtg
atggctcataccgagatgccaaagcaactttataaagaagagatcattgagagaattctg
gagtttgcaaggcatcaaatattggatgtgatgtgtgcctgtgatccatcataccgtgct
ttacacagacctaatgaaaatattgaatttgaaggtgatgattatgaagattatgatatt
gaatttggttcagcgaacaagaaacggcgtacaagcaagacttcaaaattgcggaaaccg
gcatcaagcaaggtctctactgctgtgaatactattcttcagaagttgtgcactgttgtt
ggacttctcaaggatttgttgttaattgagaggctgtcagatagttgtattctgcaactt
gtgaaaacaagcatcacgacattcttggttgataacatccagcttttgcagttgaaagca
attagtttagtcagtgggatattctatttatatgtgcaacatcgcacttatgtgatagat
gaaatgcttcagcttctttggaaattaccaaattcaaagcgagctttaagagcatatcac
ctacgtgatgaagagcaaaggcagatccagatggttactgctttgctaattcaattaatt
caatgtagtgccaaccttcctgataatttaagacaagcatctagtggtagtgctgtatta
gaagtctcaattgattctagttatccaacaaaatgcaatgaggcagcaacagaggcctgc
tgcctattctggagtcgggtacttcagcggtttgcaagtgtgaaggctcaagatgcatct
gaggtgaaactgataatggagaatcttgttacagatttactgacaacactaaatttacct
gaatatccagcttcagctcctattctggaggttctatgtgttctattactgcaaaatgct
gggctgaaatccaaggatatttcagcacgttccttggcgattgacattcttggcacaatt
gctgcaaggttgaagcgtgatgctgtgatttgcagccgggataagttttgggtacttcag
tatctgcttagtgaggatgatgctactgaaaattactcagaagatatgtgttgtgtctgt
atgggtggaagagcagaaaatttgctcatatgcaatgtttgccagaaactttttcatcct
gattgcctgggaattaaagaacacgaaatttccaatcggaattggtgctgtcagatatgc
atatgccagaaacaacttcttgtattacaatcatattgcaagtcccagtataaggatggt
gtgagtaagagcaaattgtcaaaagatgattctggaccttttggtcagattgctaaggtt
gaaattgtccagcagctgcttttgaattatcttcaagatgttgcctctactgatgacctc
catctttttatatgctggttttacctctgcctgtggtacaaagatgatttgagttgtcag
cagaagtccatttactaccttgctagactgaaatcaagaatcattgtgcgagactctatg
actgtctcttcaattttgtcaagggattcaattaagaggatcaccttagcagtagggcaa
aacagttcattttgtcgggggtttgacaagattcttcatatgcttctggcaagtctgagg
gagaattccccagtagttagagcaaaggctttacgagcagttagtatcattgtagaagct
gatccagaggtgctgggcgacaaacgagtacagtcggctgttgaaggaaggttttgtgac
tctgcaatatctgtaagagaagcagcattggagcttgttgggaggcatatagcttcacat
cctgatgtgggttttaagtattttgagaagattgcagagagaataaaagatactggagtt
agtgttcgaaagcgagctataaagattattcgagatatgtgcatttcaaatgctagtttc
tctgggtttacaagagcttgcactgagataatttcacgtgttagcgatgatgagtcaagt
atccaggaccttgtttgcaaaactttttatgagttctggtttgaggagccttcaggttta
caggctcaggtctatggagatggtagctctgttccacttgaggtggctaagaaaactgag
caaattgttgaaatgttgaggagaatgccaaatcatcagcttcttgtaactgtcattaag
cgcaatttatcccttgattttttgccacaatctgcaaaagctattggggtcaaccctgtt
tccctcacgacagtgcgtaagcgttgtgagttgatgtgcaagtgcttgctagagaaaatc
ttgcaggttgaggaagcgaacagctatgaagttgagttacatgcagttccatatgtgctt
gtattgcacgcattttgtcttgtggatcctactctgtgcgcaccagcctcaaacccctct
caatttgttgttactttgcagccatatctgaagagtcaggttgacaatcgcatggttgca
cagctactggagagtataatatttataattgatgctgtgttgcccttgatccgcaaatta
ccgcagagtattattgaggaacttgaacaagatttgaaacagatgattgtccggcattcc
ttcttgacagttgtccatgcttgtatcaagtgcctctgctctgtgagtaagatagcagga
aaaggggctgctgtagttgagcatcttattcaggtctttttcaaacgtttggatacacag
gcagttgagaacaaccagcaagtggggagatctctcttttgtcttggattgctgattcgt
tatggcagttgtctgctatcaagctcgggtaataaaaatattgatgtccgaaagagtctc
agcttgtttacaaggtacctttccgtggaggatttcgttgtcaaggttcggtcattgcag
gcattgggttttgttctgattgcaaggcctgaatatatgttggaaaaggatattggaaag
atactggagggaacattttcttctgtagttgatactcgtcttaagattcaagcattgcaa
aacatgtttgagtatcttctagatgctgagggccagatgggaacagataatgccagtcat
aatgtgtctaatttatcagttggagctgggcaaagtgttcctgttgctgctggtgctggg
gatacaaacatatgtgggggtataattcagttgtattgggacaatattttaggcagatgt
ttggatttcaatgaacaagttcgacaatctgctctgaagattgttgaagttgtgctgcgt
caagggcttgttcatcctatcacctgcgttccttaccttatagcacttgaaacagatcca
caggaatctaatgcgaaattggctcaccatcttctgatgaatatgaatgagaagtaccct
gcattctttgaaagccgattgggggatgggcttcaaatgtcatttatttttatgcaatcc
atttgtgttagtcctgaaaatagtaaccataaggtccaatctatgattcctatttctggg
aaggggaaatctgagactgactcgcttactcaagcaagacttggggtttcccgaatatac
aagcttatccgaggaaaccggatatcaaggaacaagtttatgtcctcaattgtccgaaag
tttgataatccaacctggagcaaatcagtaattgcctttttaacatactgcacggaggtc
cttggattactgccattcacctcgcctgatgaacctctttatttaatctatgctattaac
cgaatagttcaagtgaggatgggcccacttgaagcaaactttaaagcatggaattcaagg
ttttcacgaagagactgccagagtacaacttatgggaatggaatttgtcaactggggcca
aatgaaccaactcttacaacccaagtgatgccagtggacttgaatggagcattttatcac
aacatggatgatcaacctagttccaatggcatgagatctgtggatttaaatggaacaatt
caacaacagccatgtgatgcttcatcaaataacggtagcttggagctgcatgaagatttc
tcaagtttctgtggcatctcagacgatgatatggagaaaattcaggctgactgtttgtcg
gggattgcattgcagcttcttttgaagctaaagagacatctaaaaatcatgtatagcctt
aacgacgcacgatgtcaggcctataatcctgctgaacccccaaaaccagaagttctctcc
agacagaatattgcctttaatatcaatgaatgtcatttcagtctgcctgcaactccgcaa
gaattgctgcaaagataccaggaatttaagaatgcattgaaggaagacactgttgattac
tcgctttacactgcaaatattaaaaggaagcgccctacgcccagaaaagttcggaaatct
ggttatatgactggtgcaggtggagatgacgatgaggaggatgatgatgaggattggact
ggggggatacgtaagttaaatagtagtggccgcaaggttaaccttagaagcagtaggcag
tattga
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