Prosopis cineraria: 129316030
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Entry
129316030 CDS
T09047
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pcin
Prosopis cineraria
Pathway
pcin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129316030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcin04131
]
129316030
Membrane trafficking [BR:
pcin04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
129316030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
zf-RING_UBOX
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
129316030
NCBI-ProteinID:
XP_054816240
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MASIPSENGVEGDDEREEEDEEEEEEEEEGEEEDEEEPRLKYQRLGGSIPSLLASDAASC
IAVADRMIALGSHAGTVHILDFLGNQVKEFSAHSAVVNDLCFDIEGEYIGSCSDDGSVVI
NSLFSDEKIKFGYHRPLKAIALDPDYSRKTSRRFVAGGLAGHLFLNSKKWLGYRDQQVLH
SGEGPIHAVKWRTSLVAWANDAGVKVYDTANDQRITFIERPRNSPRPELLPPHLVWQDDT
LLVIGWGTSVKIASIRAHHHKIANGTYRQFPLSGTNQVDIVASFQTTYFISGIAPFGDAL
VVLAYIPAEKDGERDFSSTAPSRQGNAQRPEVRVVTWNNDELSTDALPVHGFEHYKAKDY
SLAHTPFSGSSYAGGQWAAGDEPHYYIVSPKDVVIAKPRDAEDHITWLLQHGWHEKALAV
VESGQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLP
VLVPYMPIENPRLRDTAYEVALVALATNPSYHKSLLSTVKSWPSVIYSALPVISAIEPQI
NTSSMTDSVKEALAELYAIDGQYEKAFSLYADLIKPEVFDFIDKHNLHDAVREKVVQLMI
LDCKRAVSLLIQNRDSISPAEVVKQLLNANNKCDYRYFLYLYLHSLFEVNPHAGKDFHDM
QVELYADFDPKMLLPFLRSSQHYTLEKAHEICVKRNLLREQVFILGRMGNSKQALAVIIN
DLGDIEEAVEFVNMQHDDELWEELIKQCLHKPEMVGMLLEHTVGNLDPLYIVNKVPNGLE
IPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLIKYNNEARHGIYLSNEGDDPRSK
RNDAYASQAVEKSSSVSMEAKSKTRGGGRCCICFDPFSIQNISVIVFFCCHAYHTSCLMD
STYSNGYKKEVEAPSQEAETCDVYNDYVDDEGDEEEETKSGSPRMRCILCTTAAS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgattccgtctgagaacggcgtcgaaggagatgacgagcgagaagaggaggac
gaagaagaggaggaagaggaggaagagggggaggaggaagatgaagaggagcctaggctt
aagtaccagagattgggaggcagcataccttccttgctagcaagtgatgcggcgtcctgt
attgcggttgccgaccggatgatcgctcttggctcccatgctggcaccgttcacatacta
gattttcttggcaatcaggtgaaagaattctcggctcattctgccgttgttaacgacctt
tgctttgacatagaaggtgaatatattggaagctgttctgatgacggatcggttgtgata
aacagccttttctcggatgagaaaataaaatttgggtatcatcgcccattgaaggcaatt
gctcttgacccagattattcaagaaaaacatctaggagattcgtcgctggtggcctagct
ggccatttatttcttaattcaaagaaatggttaggctatcgtgatcagcaggttctgcac
tctggtgaaggtccaatacatgcagtgaaatggagaacaagtcttgttgcttgggcaaat
gatgcaggagtgaaggtttatgatactgccaatgaccagcgtataacttttattgaaaga
ccacgcaatagtccccgccctgagctattgcctccccacctggtttggcaggatgacacc
ctcttggttattgggtggggtacgtctgtcaaaattgcatcaataagagcacatcaccat
aaaatagccaatgggacatacaggcaatttcccttgtctgggacgaaccaagtggatatt
gtggcatctttccaaaccacctatttcatctcgggaattgcaccctttggtgatgctttg
gttgttctagcttatattcctgcagaaaaggatggagaaagggattttagtagcactgct
ccttcacgtcagggcaatgcacaaagaccagaagtacgtgtagttacatggaataatgat
gaactttcaacagatgctctaccagtacatggctttgagcattacaaggcaaaggactat
tcccttgctcacactcccttctcaggtagcagttatgctggtggtcagtgggctgcaggt
gatgaacctcattactacattgtatcgccaaaggatgttgtcattgcaaaaccaagggat
gctgaagatcatattacttggcttcttcaacatggctggcatgaaaaagctttggctgtg
gttgaatctggtcaaggacggagtgaacttcttgatgaggtgggttctaggtatcttgat
catcttattgtggaaaggaaatatgctgaagcggcttctttgtgtcccaagttgctccgt
ggatcagcttcagcatgggagagatgggtttttcactttgctcatcttcgtcaactccct
gttctggttccttatatgcccatagagaaccccagactgcgtgatactgcctatgaggtt
gctcttgttgcattggctacaaatccatcctatcataagagtctcctctccacagtaaaa
tcctggccatctgtaatttattctgcattgccggttatttcagccatagaacctcagatt
aatacttcatctatgactgattcagtcaaggaggcattggcagaattatatgcaattgat
gggcaatatgagaaagctttttcattgtatgctgatcttataaagccagaagtgtttgac
ttcattgataaacacaatctacatgatgcagttcgggagaaggttgtccaactgatgatt
cttgattgcaagcgtgctgtttctctgttaatccaaaacagggactcaataagcccagcc
gaagttgtgaagcaacttctcaatgctaataataagtgtgattacagatatttcttatat
ttatatctccattcactgtttgaagtaaacccacatgctgggaaggactttcatgatatg
caggtagaactttatgcagactttgatccaaaaatgctacttccattccttcgtagcagt
cagcattatacccttgagaaggctcacgaaatttgcgtcaaaagaaatttgttgagggag
caagtattcatcttaggaaggatgggaaactcaaagcaagccctggctgtcattattaat
gatttgggggatatagaggaggctgtagagtttgttaatatgcagcatgatgatgaactc
tgggaagagctaatcaagcaatgtcttcacaaacctgaaatggtgggcatgctattggag
cacactgttggaaatcttgatcccctctacattgtgaataaggttcccaatggattggaa
atacctcggctcagggatcggctggttaaaattattactgattacagaaccgaaacctca
ctcagacatggatgcaatgatatccttaaggcggacattgttaatcttttgattaaatat
aacaatgaggcaaggcatggaatttatttaagtaatgaaggagatgatccacgatctaaa
aggaatgatgcttatgcttctcaggcggttgagaagtcctcaagtgtgagcatggaagcc
aagtcgaagaccaggggaggaggaagatgttgtatatgttttgaccccttctctatacag
aatatatctgtcattgttttcttttgttgtcatgcgtatcacacttcttgtcttatggat
tctacctacagtaatggttacaagaaagaggttgaagcaccttctcaagaggcagaaacg
tgtgatgtttataatgattatgtggacgatgagggcgatgaagaagaagaaaccaagtca
ggcagccctcgtatgcgttgtatattgtgtactactgctgctagttga
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