KEGG   Paraburkholderia caledonica: CUJ87_26900
Entry
CUJ87_26900       CDS       T05740                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pcj  Paraburkholderia caledonica
Pathway
pcj03030  DNA replication
pcj03410  Base excision repair
pcj03420  Nucleotide excision repair
pcj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CUJ87_26900
   03410 Base excision repair
    CUJ87_26900
   03420 Nucleotide excision repair
    CUJ87_26900
   03440 Homologous recombination
    CUJ87_26900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcj03032]
    CUJ87_26900
   03400 DNA repair and recombination proteins [BR:pcj03400]
    CUJ87_26900
Enzymes [BR:pcj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CUJ87_26900
DNA replication proteins [BR:pcj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CUJ87_26900
DNA repair and recombination proteins [BR:pcj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CUJ87_26900
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CUJ87_26900
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AXF17833
UniProt: A0A2Z5MKT4
LinkDB
Position
PHRS4_B:complement(2088882..2091623)
AA seq 913 aa
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDV
IGTLCTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTALKWLSQFESLDGIVAHADEIKGAVGDNLRRALDFLP
MARKLVTVERHCDLTEHLTSIEENLQSRPESREELRDVFTRHGFKTWLREVEIADAVEGP
ETDVPPALSVDHERHYETVQTWEQFDAWLQKINAAELTSFDTETTSLDPMTAQIVGLSLS
VEAGHAAYVPLAHRGPDAPVQLPRDEVLARLKPWLESAEHKKVGQHLKYDEQVLANYGIE
MRGVEHDTLLQSYVLESHRPHDMDNLALRHLGIKTIKYEDVAGKGAQQIGFDEVALDKAA
EYAAEDADVTLRLHQALHPQLAAEEALEHVYRDIEMPTSRVLRKMERTGVLIDAEKLRQQ
SSEIAARLIQLESEAYVLAGGEFNLGSPKQIGQIFFERLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTVEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSQGEDIHR
ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEQSRIGTRMIMQVHDELILEVPDAELSEVRQRLPEFMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcgggcccgatggtggtcccacaggt
gcgctctacgggatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgtttcgcgacgactggtatcccgactat
aaggcgaatcgtccatccatgccggacgatctctcgcggcagatcgagccaattcatgtg
gccgtgcgtgcactcggctggccgcttctgatgatcgacggcgtggaagccgacgacgtg
atcggcacgctttgcaccgaggcggaaaagcgtggcatgaacgtgatcgtgtcgactggg
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgaccaac
gaaaaactcgaccgcgccggcgttcttgcgaagttcggcgtccccccggagcgcattgtc
gactacctgtcgttgatcggcgataccgtcgacaacgtgcccggcgtcgagaaatgcggg
ccgaaaaccgcgctcaaatggctgtcgcaattcgagtcgctagatggcatcgtcgcacat
gcagacgagatcaaaggtgcggtaggagacaatctgcgacgtgctctggattttctgccg
atggcgcgcaagctcgtcaccgtggagcgtcactgcgatctgaccgagcatctcacgtcg
atcgaggagaatttgcagagccggcccgaatcgcgcgaagaattgcgcgatgtcttcacg
cgtcacgggttcaagacctggctgcgcgaggtcgaaattgccgatgcggtcgaagggccg
gaaaccgacgtgccgcccgcgctcagcgtcgatcacgagcgccactacgaaaccgtgcaa
acgtgggaacagttcgacgcgtggctgcaaaaaatcaacgcagctgaactgacctcgttc
gacaccgaaaccacgtcgctcgatccgatgaccgcgcaaatcgtgggcctgtccctgtcg
gtagaagcgggtcatgcggcttatgtgccgctcgcgcatcgcggccccgacgcgcccgtg
caactgccgcgcgacgaagtgcttgcgaggctcaagccgtggctcgaaagcgcggagcac
aagaaggtcggtcagcatctgaagtacgacgagcaggtgctggccaattacggtatcgag
atgcgcggcgtcgaacacgacacgctgttgcaatcgtacgtgctggagtcgcatcgtccg
catgacatggacaacctcgcgttgcgccacctcggcatcaaaacgatcaagtacgaagac
gtcgcgggcaagggtgcccagcaaatcggtttcgacgaagtcgcgctggacaaagccgcc
gaatatgccgcagaagacgccgacgtaacgttgcgtctgcatcaggcactgcatccgcag
cttgctgcggaagaggcgctcgagcatgtctatcgcgacatcgaaatgcccacgtcgcgc
gtgttgcgcaagatggagcgtaccggcgttctgatcgacgcggaaaaactgcgtcagcag
agcagcgaaatcgccgcgcgtctgattcagctggagagcgaggcgtatgtgctcgccggc
ggcgaattcaatcttggctcgccgaagcagatcggtcagatcttcttcgagagactcgaa
ttgccggtcgtgaagaagacgccgagcggtgcgccgtccaccgacgaagaagtacttcag
aagctcgcagaagattatccgctgcctaaaatcctgctggaacaccgcggcttgtcgaag
cttaagtcgacctacaccgacaagctgccgcgcatggtcaacgcaacaaccggtcgcgtg
cacacgaattacgcgcaggccgttgcggtcacgggccgccttgcgtcgaacgatccgaac
ctgcagaacattccggtgcgcaccgtcgaaggccgccgtattcgcgaggccttcattgcg
ccaccggggcacaagctcgtctcagcggattactcgcaaatcgaactgcgcatcatggcg
cacatttccggcgacgaatcgttgctgcgcgcgttctcgcaaggagaagacattcaccgc
gcgacggcggccgagattttcagcgtgaccccgctcgaagtgtcgaacgatcagcggcgc
gtggcgaaggtcatcaacttcggtctgatctatggcatgagttcgttcggcctcgcgtcg
aacctgggcattacgcgcgacgccgcgaagctctatatcgaccgctatttcgcgcgctat
ccgggcgtcgctcgctatatggacgaaacgcgtctgagcgcgaaggcgaagggttatgtc
gaaacggtgttcggccgccggctgtggttgccggaaatcaacggcggcaatggtccgcgc
cgccaggccgcggagcgcgcggccattaacgcgccaatgcaaggtacggctgccgatctg
atcaagttgtcgatgatcgcggtgcagaaatggatcgaacaatccaggatcggcacccgc
atgatcatgcaggtccacgacgaactgattctcgaagtgccggacgccgaactgtctgaa
gtgcgccagcgtctgcccgagtttatgtgcggcgtcgccgcgctgaaagtcccgctggtc
gctgaagtgggcgcgggactcaactgggaggaagcgcattga

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