Candidatus Pantoea carbekii US: BMSBPS_0022
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Entry
BMSBPS_0022 CDS
T03853
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00300
Lysine biosynthesis
pck01100
Metabolic pathways
pck01120
Microbial metabolism in diverse environments
pck01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BMSBPS_0022
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pck01002
]
BMSBPS_0022
Enzymes [BR:
pck01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BMSBPS_0022
Peptidases and inhibitors [BR:
pck01002
]
Metallo peptidases
Family M20
BMSBPS_0022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AKC31854
UniProt:
U3U7T5
LinkDB
All DBs
Position
24774..25901
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AA seq
375 aa
AA seq
DB search
MYCPIVDLAQKLIRLPSLTPHDAGCQTLLIERLEAIGFLVESMNFGDTKNFWATRGQGET
LVFAGHTDVVSPGDASLWIHNPFEPFIQEDILFGRGAADMKGSLAAMIVAAEYFIAAYPN
HKGRLAFLVTSDEEGSAFNGTAKVIDKLILRQECLNYCLIGEPSSDEIVGDVIKNGRRGS
ITGNLVVYGIQGHVAYPHLAENPVHRSIPALNELIQTEWDKGNVFFPPTTMQIVNLKSGS
GSNNIIPYTFSVQFNFRFSNQITDVMIRDQVESLLKRHQLHYTIEWNTSAQPFLTSKGKL
IDAVVSAIISCNKIKPRILTTGGTSDGRFITRMGTQVVELGPINKTIHKINECVKISDLK
VLSSMYQHIMQELIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtccaattgttgatttggctcaaaagctaattcgcttaccttctcttactcct
catgatgcaggatgtcaaactctgttgatagaacgcttagaagctattggttttttagta
gaatcgatgaattttggcgatacaaagaatttttgggcaacacgtggtcaaggtgaaaca
cttgtttttgctggtcatactgacgtagtctcccctggcgatgctagtttatggatacat
aatccttttgaaccttttattcaagaagatattttatttggacggggtgctgcagatatg
aaaggatcgttagcagctatgatagtagcagcagaatattttattgcagcatatcctaat
cataaaggacgtttagcatttttagtgacttctgatgaagaaggtagtgcttttaatggt
acggcaaaagtaattgacaaattaatattgcgtcaagaatgtttaaactattgtcttatc
ggtgaaccttctagtgatgagattgtcggtgatgtaataaagaatgggcgacgtggatca
attacaggtaatttggtagtatacggtatacagggtcatgtagcatacccgcatttagca
gaaaatccagttcatcgtagcatacctgcattaaatgagcttattcaaacagaatgggat
aaaggaaacgttttttttccacctactacaatgcagattgttaatttaaaatctggcagt
ggtagtaataatattattccttacacattttccgtacagtttaacttccgatttagtaat
caaattactgatgtgatgattagagatcaagttgaatcattgcttaaacgtcaccaacta
cactataccatagaatggaatacgtctgctcaaccttttttaacttcaaaaggtaaatta
attgatgctgttgtaagtgccattataagctgtaataaaattaaaccgcgtatattaact
accggaggaacatctgatggacgttttattacacgtatgggtacacaagttgtagaatta
ggccctataaataagactattcataaaattaatgaatgtgtaaaaatatctgatttaaaa
gtactatctagtatgtatcaacatattatgcaagagttaattgcttag
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