Candidatus Pantoea carbekii US: BMSBPS_0183
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Entry
BMSBPS_0183 CDS
T03853
Name
(GenBank) DNA gyrase subunit A GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pck
Candidatus Pantoea carbekii US
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pck03032
]
BMSBPS_0183
03400 DNA repair and recombination proteins [BR:
pck03400
]
BMSBPS_0183
Enzymes [BR:
pck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BMSBPS_0183
DNA replication proteins [BR:
pck03032
]
Prokaryotic type
DNA Topoisomerases
BMSBPS_0183
DNA repair and recombination proteins [BR:
pck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMSBPS_0183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AKC32006
UniProt:
U3U9K1
LinkDB
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Position
258050..260662
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AA seq
870 aa
AA seq
DB search
MSGLAKEITLVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDAAVYDTLVRMAQPFSMRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKISHELLSDLDKETVDFISNYDNSEQIPAILPTKIPNLLINGSSGIAVGMAT
NIPPHNLTEVINACLAYIEDENISFEELIKHIPGPDFPTAAIINGRYGIEDAYRTGRGKI
HIRARSEVKNDVKTGRQSIVIHEIPYQVNKARLVEKIAELVKQRKLEGISALRDESDKDG
MRIVIELKRNVVSDVVLNNLYSLTQLQVSFGINMLALHQGQPKIMTLKDIIKSFINHRCE
VVTRRTVFELRKARERAHVLEGLIIALTNIDSIIELIRRSPTLAKAKVELISQTWKSTSL
LKMFDYSNNNLFSSIYSKSTFNKFDNTYHLTEQQIEAVLDLRLQKLTSLENEKLLIEYKE
VINQILKLISILKSTDCLMAVIRTELEKIRDQFGDKRRTEITVNSAELNVEDLINQEDVI
VTLSYHGYVKYQPLSDYEAQRRGGKGKSAARIKEEDIIDCLLVANTHDSILCFSSRGRLY
WMKVYQLPEASRSARGRPIVNLLPLDVNERITAILPVREYTKGFNILMSTAKGTVKKTAL
QEFSRPRSTGIIAINLHKNDELIGVALTNGSDEVMLFSAAGKVVRFSEATVRATGRLASG
VRGIKLAENDKVVSLIVPRAEGAILTVTQNGYGKRTINKAYPLKSRATQGVISIKVTKRN
GPVVGAVQVVDNDQIMMITNTGTLVRTRVSEVSIVGRNTQGVILIRTAENENVVGLQRVV
EPLKDQEFKNINDHVIESPEISKFELNNSH
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcttgcaaaagaaattacactagtcaatatcgaagaagaattaaaaaattct
tatctcgattatgctatgtcagtcattgtaggtcgagccttacctgatgtacgtgatggt
cttaaaccagttcaccgccgtgtgctttttgctatgagcgtcctgggtaatgattggaat
aaaccttataagaaatccgctcgtgtagttggtgatgtaattggaaagtaccatcctcac
ggtgatgctgcagtatatgacactttagtgcgaatggcacaaccgttttcgatgcgttat
atgttggttgatggtcaaggtaactttggttctattgatggtgattctgctgcagcaatg
cgttacacagaagtacgcatggcaaaaatttcccatgaactactgtctgacttggacaaa
gaaaccgttgattttatatcaaactacgataatagtgaacagattcctgcaattttgcca
acaaaaatacctaatttattaataaatggttcatctggtattgcagtaggcatggcaacc
aatattccgcctcacaatttaacagaagtaattaacgcttgtcttgcttatattgaagat
gaaaatatcagctttgaagaattgatcaaacatatacctggcccggattttcctactgca
gcgattatcaatggtcgttatggtattgaagatgcataccgcaccggtcgcggtaaaatc
cacatccgtgctcgtagtgaagttaaaaacgacgttaaaactggacgtcaaagtattgtt
atacatgagatcccttatcaggttaataaagctcgtttagttgagaaaattgctgaatta
gtaaaacaaagaaaacttgaaggtattagtgcactacgtgatgaatctgataaagatggt
atgcgtatagtaattgaactaaaacgtaatgtagtgagtgacgtagtattaaataatctt
tattcattgacccaacttcaggtatcatttggcattaatatgttagcactgcatcaaggt
cagccaaaaatcatgacgttgaaagatatcataaaatctttcataaatcaccgttgtgaa
gtagtaacacgtcgcactgtttttgaattacgcaaggcacgtgaacgtgctcatgttctt
gaaggtttaattattgctcttaccaatattgattctatcattgagttaattcgtcgttct
cccactttagctaaagctaaagtagagttaatttctcaaacatggaaatctactagtctt
ttaaaaatgtttgattattctaacaataatttattttcttctatatatagcaaatctacg
tttaataagtttgataatacttatcatttgactgaacaacaaatagaagctgttttagat
ctgcgattacaaaagttaactagtttagaaaatgaaaaattacttattgaatacaaggaa
gtaattaatcaaattttaaaactcatttccatactaaaaagtactgattgtttaatggca
gtaattcgaacagaattagaaaaaattcgtgatcaatttggagataagcgtcgcactgaa
attacggtaaatagtgcagaacttaatgttgaagatttaattaatcaagaagatgtgata
gtgacattatcgtatcatgggtacgttaaatatcaacctttatcagattatgaagctcaa
cgacgtggtggtaaaggtaaatctgcagcacgtatcaaagaagaagacattatcgactgt
ttgttagttgccaatactcatgatagcattctatgcttttctagtcgtggtcgtttatat
tggatgaaagtctatcaattaccagaagctagtcgtagtgctcggggtcgtccgatagtt
aatttgctaccgctcgacgtaaatgaacgtattactgctattcttcctgtacgtgaatat
accaaaggttttaatattttgatgtctactgctaaaggaactgttaaaaaaactgcatta
caagaatttagtcgtccgcgtagtacaggaattattgctattaatttacataaaaatgat
gagcttattggtgttgcattaactaacggtagcgatgaagtgatgttattttctgctgca
ggtaaagtagtgcgttttagcgaagctactgttcgagctacaggaagattagcatcaggt
gtaagaggcatcaaactggctgaaaatgataaagttgtctctttaattgtaccgcgtgca
gaaggtgctattcttactgtaacacagaatggatacggaaaacgcactattaataaagca
tatccattaaaatcacgtgcaactcaaggtgttatttcaattaaagtcaccaagcgtaat
ggaccagttgttggagcggtgcaagtggttgataatgatcaaattatgatgattactaat
actggcacattagtgcgtacgcgagtctctgaagtaagtatagtaggtcgtaatactcaa
ggtgtgattttaattcgtactgccgaaaatgagaatgttgttggtttacaacgtgttgtt
gaaccattaaaagatcaagagtttaaaaatattaacgatcatgtaatagaaagtccagag
attagcaaatttgaattaaataattcacattaa
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