Procambarus clarkii (red swamp crayfish): 123763217
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Entry
123763217 CDS
T07930
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123763217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123763217
03036 Chromosome and associated proteins [BR:
pcla03036
]
123763217
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123763217
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
123763217
Chromatin remodeling factors
BAF complex
123763217
PBAF complex
123763217
GBAF(ncBAF) complex
123763217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
HDA2-3
ResIII
BRK
DEAD
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
123763217
NCBI-ProteinID:
XP_045606223
LinkDB
All DBs
Position
LG36:6071309..6119378
Genome browser
AA seq
1699 aa
AA seq
DB search
MEIPLYLGPFHVCHRPGLGTQRGRHNKTRPHLVRKLQPKTEWRGRTPPTQRNKQTSYTTA
VLLVSSRMSAQSPNPGSAASPMGPPQQSLSPMPPPQATSPAVGPPQAPSPMGPPQAPSPM
GPPVMSPGPGVPPTQQGPPGGPGMSPQGGPSPHHSYPQGPQGGQGWPQTAGSYPNSYPPQ
PQSQQGSSMGPNSHHPSQGPPGGPSGGGLPPPSGGGPNGPSPSGGSFQQENLNALQKAIN
TMEDKGLQNDPRYTDLVNMRAKYGNMNMGPPPPGSGSTSGGSVPPGPPSGPGYGPPGAGV
PDAQRAGLLNPSQMHQLRAQIMAYRCIARNQPVPSHVSALAQGRRAEQDPTRPPGPGLPG
PQGPPSGPPSGPPTGPPAGPPTGPPTGPPTGPPTGPPGVQGPPGPPGPPGPPSMQYPRHP
GPMPGVRPPYNGTGPSQTPPPPSGVMSSQPVPTGPVPGTTPRPQVPPAAVGTTPVPTAGG
KTSRVTPITKPSGVDPLILLQERENRLAARIAHRIEELSGLPATMAEDLKTKAQIELRAL
RLLNFQRQLRAEVVSCNRKDTTLETAINIKAYKRTKRQGLREARITEKLEKQQKLEAERK
KRQKHQEYLNAVLQHGRELKEFHRQNNQKISKLNKSLILHHMNAEREKQKEQERIEKERL
RRLMLEDEEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMVKAHKEDQRLKHREERKKAR
EERRRAREAIADNGEEGDNQKRHIPVMESATGAIVCGLQAPLEENLEAFLTANPGWEILP
EEDTESSDEDESKVEKEKVKEPESTSEEKVEPVLDEDGNPREVVFKKAKVEDDEYKDASG
EKNYYSIAHTIKETVTEQAKMMVNGLLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTI
QTIALLTYLIETKKNNGPYLIIVPLSTISNWALEFEKWAPTVQVVTYKGSPQVRRIVQSQ
MRATKLNVLLTTYEYIIKDKAVLSKLRWKYMIIDEGHRMKNHHCKLTQTLNTFYNAPHRL
LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR
LHKVLRPFLLRRLKREVEAQLPDKVEYIIKCEMSGLQHVLYRSMQTRGVMLCAEDKKGQK
SNTKALMNTIMQLRKLCNHPFMFQHIEEAYCNHTGFAGGIVQGPDLYRASGKFELLDRIL
PKLKTSDHRVLLFCQMTQLMTIMEDYLMYKGFKYLRLDGMTKSEDRGELLRLFNTSREYF
LFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNTV
EERILAAARYKLNMDEKVIQAGMFDQKSTGSDRRQFLQAILSNDNEDDEEEDEAPDDETI
NQMIARGEDEFEIFQKIDDERKKESTRPRLMAEDELPEWMLREEDSEEIEEEEPEELGDR
RARSKKEVDYTDSLTEKEWLRAIGAVEEDGKEAMEEEEEEVTSNKNKRGSKGKRKRQDEM
DNDDDPKPKKRGRPAREKPGPKNKRLIRQLKRLMDIVIKYEDSDGRVLSEPFMKLPSRRE
LPDYYGIIKRPMDICKILSKIEEGRYEDLNELETDFMLLCRNAQEYNEEASIIYEDSIVM
QSVFVNARERIETEADNLPEEDEEEDEEEEEEEDSRGKKGKKSKGDKSRGRRKRVKYADD
SDDDDEDDDDDDVSKKEPE
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccccttgtacttggggccattccatgtctgccatcgaccagggttaggcacc
cagagaggtaggcataacaaaacaagaccccacttggtaagaaaattgcaaccgaagact
gaatggagaggcagaactcctccaacccaaagaaacaagcaaacatcatacaccaccgcc
gtgcttcttgtctcttccaggatgtcggctcaaagtcccaatcctgggagtgcagcatcc
ccaatgggtccgccccagcagtccctttctcctatgcctccaccccaggctacatctcca
gccgttgggccacctcaggctccatctccaatgggtccaccacaggcaccatcacccatg
ggtcctccagtaatgtcaccaggtcctggtgtaccaccaacacagcagggacctccaggg
ggccctggcatgtcacctcagggtggaccaagccctcaccactcttaccctcagggtcca
caaggaggccagggttggccacaaactgctggttcatatcccaacagttatcctccacag
cctcaatcacagcagggatcatcgatgggccctaacagtcaccacccttcccagggtcct
cccggtggcccttcaggtggtggactgcctccaccaagtggtggtggaccaaatggtccg
agtccaagtggtggtagctttcagcaggagaaccttaatgctttgcaaaaagctatcaac
acaatggaggacaagggtttacaaaatgatccacgttatactgatttagttaacatgagg
gctaagtatggtaatatgaatatgggtccaccaccaccaggcagtggttctacaagtggt
ggtagtgttccaccaggccctccaagtggacctggatatggccctcctggtgctggggtc
cctgatgcacaaagagcaggtttgctaaatccttcacaaatgcatcagcttcgggcccaa
ataatggcctatcgttgcattgctcgtaatcaaccagttccaagccacgtgtctgctctt
gctcagggtcgccgggctgaacaagaccctactcggccacctggacctggtcttcctgga
ccacaaggacccccaagtggaccaccaagtggaccaccaactggccctccagcaggtcct
cctactggccctccaactggaccaccaactggacctcccactggacctcctggtgttcag
ggtccaccaggcccaccaggaccccctggaccacccagtatgcagtatccaagacaccct
ggaccaatgccaggggtgcggccaccatacaatggaacaggcccatcacagacaccaccc
ccaccatctggtgtcatgagctcccaacctgtaccaactggacctgtacctgggaccacc
ccaaggcctcaggtgcctccagcagctgttgggacaacccctgtgcctactgctggtggc
aaaacgagccgtgttactcctattactaagccctctggggtggatcccttgatacttcta
caggagagagaaaacagattagctgcacgtattgctcatcgaattgaagaattgagtggc
cttccagcgacaatggcggaagatttaaaaacaaaagctcagattgagcttcgagcatta
cgcttactcaatttccaacgccaattaagggccgaggttgtaagctgcaatcgaaaagat
acaactttagaaaccgctattaatataaaggcatacaagagaaccaaacggcaaggtctg
agagaagctcgtattactgaaaaactagaaaagcaacagaaattagaggccgagcgaaag
aagcggcaaaagcaccaagaataccttaatgcagtgctacagcatggtagagaactgaag
gagttccatcgccaaaataatcagaagattagtaaattaaataagtctctcatactgcac
catatgaatgctgagagagagaagcaaaaggaacaggagcgcatagagaaggaacggttg
aggcgcctcatgctggaggatgaggaaggctatcgtaaattgattgatgaaaagaaagat
aaacgtttagcgtaccttctcactcagactgacgagtttattgccaacctgacagagatg
gtcaaagctcataaagaggatcagcgactgaaacatcgagaagagaggaagaaagctcgt
gaggaacgtcgtcgtgcccgggaggccattgctgataatggtgaagagggcgacaatcag
aagcggcatattcctgttatggaatcggcgaccggagccattgtttgtggcttacaggct
cctctggaggaaaatcttgaagcatttttgactgccaatcctggctgggaaattctaccc
gaggaagatacagagtcgtctgatgaagatgaatcaaaagtagaaaaggaaaaagtgaaa
gagcctgagtcaacaagtgaagaaaaagtagaaccggtcctagatgaagatggcaatccc
agggaggtggtgttcaagaaggccaaggtggaggatgatgagtacaaagatgcatcggga
gagaagaactattactccatagctcacaccattaaggaaactgtaacagagcaagccaaa
atgatggtcaatggacttctcaaagaatatcaagtgaagggtcttgagtggcttgtgtcc
ttgtataacaataatcttaatggtatcctggctgatgagatgggcctgggaaaaactatc
cagactattgcacttctcacatacttaattgagaccaagaagaataatggaccatatctc
atcattgtacccctctccaccatatctaattgggctcttgagtttgaaaaatgggctcca
actgttcaggttgtgacttacaaagggtcacctcaggttcggcggattgttcaaagtcag
atgagagccacgaagctcaatgttttgctcaccacatatgaatatattataaaggataaa
gcagtgttatccaagttgcgatggaaatacatgataatcgacgagggtcaccgcatgaag
aaccaccattgcaaacttacacagacactgaacacattctacaatgcaccacatcgctta
ttgctgacgggaacaccacttcagaacaagctgccggagctatgggctcttcttaacttc
cttcttccatccatctttaaatcttgctctacatttgagcagtggttcaatgctcccttt
gcaactactggtgaaaaggttgaattaaatgaagaagaaactatcttgatcattcggcgt
ctgcataaagttcttaggccatttttactacgtcgactcaagagagaagttgaggcccaa
ttaccagacaaggtggaatacatcatcaagtgtgaaatgtcgggtctacaacatgtttta
taccgctccatgcagacaaggggagtcatgttgtgtgctgaagataagaaaggtcagaag
agtaataccaaggctctcatgaacaccattatgcagcttcgtaaactttgtaaccatccc
ttcatgttccaacacattgaggaagcctattgcaatcatactggatttgcaggtggcatt
gttcagggaccagatctataccgtgcatctggcaaatttgagcttctagaccggatcttg
cctaaactgaagaccagtgatcaccgagtgctgctcttctgccagatgacacagcttatg
actattatggaggattacctcatgtataaaggcttcaaatacttgagacttgatggtatg
actaaatcagaagaccgtggtgagcttttacgtctattcaatacatctagagaatatttc
ttgttcctgttgtcgacccgtgcaggtggtttaggactgaacctccagtctgccgacaca
gttatcattttcgattcagattggaatccacaccaggatcttcaggcccaagatcgtgcc
catcgtattggccagaaaaatgaggtgagagtgttgcgtctgatgactgtgaacaccgtt
gaagaacgtatcttggcggctgctcggtataaactcaacatggatgagaaggttattcaa
gcgggtatgtttgatcagaagtctactggatctgatcgacgacagttccttcaggctatt
ctttccaatgacaatgaagatgatgaagaagaggatgaagccccagacgatgaaactatt
aatcagatgattgctcgtggagaagatgaatttgaaatctttcagaaaattgatgacgaa
agaaagaaggaatcaactaggccacgtcttatggccgaggatgaattacccgagtggatg
ttgagggaggaagattcagaagagatagaagaagaggaacccgaggagttgggagatcgt
cgggctcgttctaagaaggaagtagactacacggatagtttgacagaaaaagaatggctt
cgtgctattggggctgttgaagaggatgggaaagaggctatggaagaggaggaggaagag
gtcactagcaataagaataagaggggctctaaaggaaagagaaaacgacaagatgagatg
gataatgatgacgaccctaagccaaaaaaacgtggacgtcctgctagggaaaaaccagga
ccgaaaaataaaaggctaattcgtcaactgaaacgtctcatggatatagttataaaatac
gaagacagtgatgggcgagtactgagtgaacccttcatgaagttaccatctcgccgtgag
ctgcccgattactatggaataattaagagaccaatggatatatgcaagatcttatctaaa
attgaagaaggaagatatgaagacctgaacgaactggagactgactttatgctcctgtgt
cgcaatgcccaagagtacaatgaagaggcttctatcatctatgaggattccattgtaatg
cagagtgtctttgttaatgctcgcgagcgtatagaaacagaggctgataatctccccgag
gaagatgaggaagaggatgaagaggaggaggaagaggaagacagtagaggaaagaagggg
aagaaaagtaagggagataaaagcagagggagaaggaaaagagtaaaatatgccgatgat
tccgatgatgatgatgaggatgatgatgatgacgatgtgagtaagaaagaacccgagtga
DBGET
integrated database retrieval system
