Paraprevotella clara: PC1C4_12410
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Entry
PC1C4_12410 CDS
T08732
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pclr
Paraprevotella clara
Pathway
pclr00470
D-Amino acid metabolism
pclr00550
Peptidoglycan biosynthesis
pclr01100
Metabolic pathways
pclr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PC1C4_12410 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PC1C4_12410 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PC1C4_12410 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pclr01011
]
PC1C4_12410 (ddl)
Enzymes [BR:
pclr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PC1C4_12410 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pclr01011
]
Precursor biosynthesis
Amino acid ligase
PC1C4_12410 (ddl)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
CPSase_L_D2
PHA-1
Motif
Other DBs
NCBI-ProteinID:
BDI74519
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All DBs
Position
complement(1725473..1726480)
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AA seq
335 aa
AA seq
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MKKTIAIVAGGDSSEHDVSLRSAEGIHSFLDKERYEVYIIEIKGMTWEAHLKDGSRSNVD
RNDFSFMEGGKRIRPDFAYITIHGTPGENGILQGYFDLIHLPYSTSDVLVEAMTFNKFTL
NQYLKGFGVSVSESLIVRKGFEHLVTDDEIIEKIGLPCFVKPNAGGSSFGVTKVKSADQI
HEAILKAMCESDEVMVEAFMEGTEISQGCYKTQEKEVVLPATEVVSDNEFFDYNAKYNGQ
VREITPARLKEETAERVSLITSMIYDILGCSGIIRVDYIITHTTDENGKERERINMLEVN
TTPGMTATSFIPQQVRAAGMDMKDVLTDIIENKLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaatcgcgattgtagccggaggggattcctccgaacacgacgtttccctt
cggagcgccgaaggtatccattcctttctcgacaaggaaagatatgaagtttatatcatt
gaaatcaaaggtatgacatgggaggctcatctgaaagacgggagccgttcgaacgtggac
cgcaacgatttcagcttcatggaaggcggcaagcgtatccggcctgatttcgcctacatc
accatacatggcactccgggcgagaacggtatcctgcaaggatatttcgacctcatccat
ctgccttactccacatcggacgtgctcgtggaggccatgacgttcaataaattcaccctg
aaccagtacctgaaaggattcggtgtcagtgtcagcgaaagcctcatcgtccgtaaaggg
ttcgagcatttggtcaccgatgacgaaatcatagaaaaaataggtttgccctgtttcgtg
aagcccaatgcgggcggttccagtttcggtgtgacgaaagtgaaaagcgccgaccagata
cacgaagccatcctgaaagccatgtgcgaaagcgacgaagtgatggtggaagccttcatg
gaaggaacggaaatcagccaggggtgctataagacgcaagagaaagaagtggtgctgccc
gccaccgaagtggtgagcgacaacgagtttttcgattacaacgccaagtacaacggacag
gtcagggaaatcacgccggcacgcctgaaagaagaaaccgccgaacgcgtaagcctcatc
acctccatgatatatgacatattgggatgtagcggaatcatccgggtggactatatcatc
acgcacaccaccgacgaaaacggcaaagagagagaacgaatcaacatgctggaagtcaac
accacaccgggcatgaccgccaccagtttcattccccaacaggtacgggctgccggaatg
gacatgaaagacgtgttgaccgacatcatcgaaaacaaactgtcataa
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