Pedobacter cryoconitis: AY601_0302
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Entry
AY601_0302 CDS
T04341
Name
(GenBank) Alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00300
Lysine biosynthesis
pcm00470
D-Amino acid metabolism
pcm00550
Peptidoglycan biosynthesis
pcm01100
Metabolic pathways
pcm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AY601_0302
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AY601_0302
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AY601_0302
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AY601_0302
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
AY601_0302
Enzymes [BR:
pcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
AY601_0302
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
AY601_0302
Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
Precursor biosynthesis
Amino acid ligase
AY601_0302
Racemase
AY601_0302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AMP97267
UniProt:
A0A127V7P3
LinkDB
All DBs
Position
337930..340389
Genome browser
AA seq
819 aa
AA seq
DB search
MSEINYTIQQLAELLNIKSFELKYPALINSLLIDSRVVISPETSLFFALSAARDGHEFLA
EAYANGIKNFVVSKAGYQEKFPEANFLLVDDVHAALQLIAANHRNAFDLEVIAITGSNGK
TIVKEWLYQLLSSDFQVVRSPKSFNSQLGVPLSVWQIHQEHTLGIFEAGISKNGEMQQLA
EIIQPTIGILTNIGEAHAEGFTSPEEKLKEKLKLFKDVKLFIYSPDYTVNIPADELPGEQ
QFSWSTKTEADLSILFVEPINGKSYIKALYKGEEIECLLPFGDGASVENGIICWACLLAL
GYTPEQADIRLEHLTAVNMRLELKNGINQCSIIDDSYSADISSLAIALDFLNQQNQHPLK
TVILSDLPETGKTDVELYTEIAALLKQKQVNRLVGIGSHISAFASLFDLPAVFYENTEEF
IQKFAEITFNSETILVKGARRFEFERISKLLTQKVHGTVMEIDLNALASNLKFYKAKLAP
GVKVMAMVKAFSYGSGSFEIANLLQYHKVDYLAVAYTDEGIALRKAGITLPIMVMSPEPF
AFEAILKYKLEPELYNLDILKAFVAFLPETQTAYPVHIKIDTGMHRLGFEEPDLPALLPL
LNQTKKIKVVSAFSHLAASEDPQHDEFTGYQLETYLHLSGALRKGLGYGFIQHISNTSAI
TRHPEAQLDMVRIGIGLYGFDSGLADKSGLCTVAVLKTTITQIKTVGPKDTIGYGRWGVL
PDGGTTATIKIGYADGYRRSFGNGVGKMLVNGKFAPVIGTIAMDMCMLDVTGLDAKIGDE
VIIFNNELTVDDLAKQINTIPYEILTNISQRVKRIYFYE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataaactataccattcagcaattggctgaacttttaaatataaaatccttc
gaattaaaatatcccgctttaattaatagcctgcttatagacagccgtgtagtgatcagc
ccggaaacctctttgttctttgctttgtcagctgccagagacggacatgaatttcttgca
gaagcctatgccaatggcattaaaaactttgtcgttagtaaagctggatatcaggaaaaa
tttcctgaagctaactttcttttggtagatgatgtgcatgcggccttacaactcatcgct
gcaaatcaccgaaacgcatttgatctggaagtcatcgcaattacagggagtaacgggaaa
actatcgttaaagaatggctatatcaattactatcctcagatttccaggttgtcaggagc
ccgaaaagttttaactcacagcttggtgttcccctttctgtctggcaaattcatcaggaa
catacccttggaatctttgaagctggtatctctaaaaatggagaaatgcagcagctcgct
gaaattatacagcccactattggtatacttaccaatataggagaagcccatgccgaagga
tttacctctccggaagaaaagttgaaagagaaattgaaactcttcaaagatgttaaacta
tttatttacagtcctgattataccgtaaatatacctgcagatgaactaccaggtgaacaa
cagttttcctggagcacaaaaactgaagcagatttgtccattttgtttgtggaaccaatc
aatggtaaaagctatatcaaagcgctttacaaaggagaagaaattgaatgcctgcttcca
tttggcgacggggcatccgtagaaaacggaattatctgctgggcctgtttattagccctg
ggatataccccagagcaagcagatattcgtttagaacatttaacagctgtaaacatgcgt
ttagaactgaaaaatggtatcaatcaatgctccattattgacgattcctatagcgctgac
atttcttcgcttgctatagcccttgattttctgaatcagcaaaatcagcatccactgaaa
acagtgatcctgtcagacttgcccgaaacgggaaaaacggatgtggaactttatactgaa
attgccgctttgttaaaacaaaagcaggtaaacaggttggttggtataggatctcatatc
agtgcattcgcttccctctttgatttacctgcagtattctatgaaaatacagaagaattc
attcagaagtttgctgaaataacatttaacagtgaaacgatcctggttaaaggagcaagg
cgatttgaatttgaaaggatcagtaaactcctgacgcaaaaagttcatggaacagtcatg
gaaattgatttaaacgcattagccagtaatctgaaattctataaagcaaagttagcaccc
ggcgtgaaagtaatggccatggtaaaagccttctcttatggcagcggaagcttcgaaatt
gccaatttattacaatatcataaagtagattaccttgctgtagcttatacagacgaagga
attgctttaagaaaagcagggataactttaccaatcatggtgatgagtcctgaacctttt
gctttcgaggcgattttgaaatataagctggaacctgaactttataaccttgatattctg
aaagcatttgttgctttcttacctgaaacacaaacagcttatccagttcatattaaaatt
gataccgggatgcacagactgggatttgaagaaccagatcttccagcgttattgcccttg
ctcaaccagactaaaaagataaaagtagtttctgcattttcgcatcttgcagcaagtgaa
gacccgcagcatgatgaatttacaggctatcagctggaaacctatttgcatcttagcgga
gccctgcgcaaaggattaggttatggctttatacagcatatttccaatacctcggcaata
accagacatcccgaagcgcagctggacatggtcagaataggtataggtttatatggcttt
gacagtgggctggcagataaaagcggactctgtaccgtagctgttttaaaaactacgatc
acacaaattaagacagtaggccctaaggatactatcggttatgggcgctggggcgttttg
cccgatgggggcactacagcaactataaaaataggttacgcagatgggtaccgcagatcg
tttggaaacggggtagggaagatgctcgttaacggtaaatttgctcctgtaatcggtacc
attgccatggatatgtgtatgcttgatgtaaccggactggacgcgaaaattggggacgag
gttattattttcaataatgagctgacggttgatgatttagcgaagcaaattaatactatt
ccctatgagattttaacaaatatctctcaaagggtaaaacgcatctatttttatgagtag
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