Pedobacter cryoconitis: AY601_0308
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Entry
AY601_0308 CDS
T04341
Name
(GenBank) Recombination protein RecR
KO
K06187
recombination protein RecR
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AY601_0308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_0308
DNA repair and recombination proteins [BR:
pcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AY601_0308
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AY601_0308
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
VWA_N2
Motif
Other DBs
NCBI-ProteinID:
AMP97273
UniProt:
A0A127V7J3
LinkDB
All DBs
Position
344290..344907
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AA seq
205 aa
AA seq
DB search
MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVDTFGNSIIRLRKDIKHCSI
CHNISDLPICGICSSNKREKEIICVVEDTRDVMAVENTSQYFGVYHVLGGLISPMDGIGP
SDLFIDSLVQRVATTPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITTIARGIAFGGE
LEYADEITLGRSIVTRVPYVNSITK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcttccaagctactcgaagatgctgttaacgaattttctaaactacctggt
gtaggacaaaagactgcattgcgtctggtactgcacttattgaacaaggaacaagaggaa
gtagatactttcgggaactccatcatcaggctgagaaaagatatcaagcactgtagcatc
tgtcataatatatcagatctgcccatatgcgggatttgcagttccaataaacgggagaaa
gaaataatttgtgtggtcgaagatacgcgtgatgttatggctgtagaaaatacctctcaa
tattttggcgtttatcatgtattaggcggtttaatttctccaatggacggaatcgggcca
tccgatctgtttatagattctttggtccagcgggttgctactacacctgttaaggaggtt
attttagccttaagtgcaactatggaaggcgataccacacttttttatctttacaaaaga
ctcaaagactttcaaataccaattactactattgcccgtggaatcgcttttggcggtgaa
ctggaatatgcagacgaaatcactttaggccgctcaatcgttaccagagtaccctatgtc
aattcaataaccaaatag
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