Pedobacter cryoconitis: AY601_4682
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Entry
AY601_4682 CDS
T04341
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00061
Fatty acid biosynthesis
pcm00071
Fatty acid degradation
pcm01100
Metabolic pathways
pcm01212
Fatty acid metabolism
pcm02024
Quorum sensing
Module
pcm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AY601_4682
00071 Fatty acid degradation
AY601_4682
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AY601_4682
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcm01004
]
AY601_4682
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcm04147
]
AY601_4682
Enzymes [BR:
pcm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AY601_4682
Lipid biosynthesis proteins [BR:
pcm01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
AY601_4682
Exosome [BR:
pcm04147
]
Exosomal proteins
Exosomal proteins of breast milk
AY601_4682
Exosomal proteins of breast cancer cells
AY601_4682
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AMQ01512
UniProt:
A0A127VJR7
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All DBs
Position
5461057..5462841
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AA seq
594 aa
AA seq
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MPVTVTRVFDLLKYNLEKFPKDEFISGKSNGVWKKYSTQQFSTTADNLSKGLLQLGMGKG
DRIAVMSHNRPEWNIADFAVNQFGGYHVPLYPTLAEHDIKFILENAGVSVLFVEDETLFK
KVKPIGEAVNPDLKIYTFNEVPGANHWSLLIDAGAKSEGIELETYRAAVTPDDVLTLIYT
SGTTGTPKGVMLTHNNLVQNFINSAVVVPQGLENALSFLPLSHIFERMIVYLYLYMGVAV
YYAESMDTIVADIQSVKPNAFSTVPRLLEKVYDKIMEKGKALTGIKKGIFFWSVALAEQY
DMKSGWFYNFKLGIARKLVFKKWQEALGGNIVVIVSGGAALNPRLARIFWAAGMPVFEGY
GLTETSPVITVNHFDNAMFGTVGPVIDGVEVKIAADGEVLTRGHNVMKGYYKREDLTAEA
IDKDGWFHTEDIGELVNGKFLKITDRKKEIFKTAGGKYVAPQMLENKYKESVLIDHIMVL
GENRKFPSALIVPNFEALKSWCTKKGITYTTDHEMVQNTQVLEKYNQEIVNGSKDFGKWE
QVKRFVLLTKAWSIEGGEFTPKLSLKRKIILEKNKELIEKMYKDAADYKSEKHE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaactgtaacaagagtatttgatttacttaaatacaacttagagaaattccca
aaagacgagtttattagtggaaagagtaatggggtatggaaaaaatatagcactcagcaa
ttttcaactactgcagataacctgagtaaaggcttactgcagctggggatgggtaaaggt
gataggatagctgtaatgtcccacaacagaccagaatggaatattgcagattttgctgta
aaccagtttggcggataccatgtgcctttgtatcctacactggctgagcatgatattaag
tttattctggaaaatgcaggtgtaagtgtattgtttgttgaagatgaaacattattcaaa
aaggtaaagcctattggtgaagctgttaatccagaccttaagatttatacttttaacgaa
gtcccaggtgcaaatcactggagtttactgatagatgcaggtgcaaagagtgaaggaatt
gagctggaaacttaccgtgcagctgtcacccctgatgatgtgctgactttgatctatact
tctggtacaaccggaacgccaaaaggtgttatgctgacgcacaataacctggttcagaat
tttataaattctgctgttgttgttccgcagggtttggaaaatgcactcagctttttgccg
ttatcccatatttttgagcggatgattgtctacctctatctctatatgggggtcgctgtc
tattatgcggagagtatggatactattgtcgcggatatccagtccgttaaaccaaatgct
ttttctaccgttccacgattactggaaaaggtttatgataaaatcatggaaaaggggaaa
gcgcttacagggattaaaaaaggtattttcttttggtcagttgcgcttgctgaacaatat
gatatgaaaagtggctggttttacaactttaaactggggattgccagaaaactggtcttt
aagaaatggcaggaagctttgggtggaaatatcgtagtgattgtttctggtggtgctgca
ttaaacccacgcctggcacgtattttctgggcagcaggaatgcccgtttttgaaggttat
ggcttaacagaaacttcaccggtgattacagttaaccatttcgacaatgccatgtttggt
actgtcgggcctgtgatcgatggggtcgaagttaagattgccgctgatggagaagtgctg
accagaggtcataacgttatgaaaggctattacaaacgggaagatctgactgctgaagct
attgataaagacggttggtttcatactgaagatattggggaactggtcaatggaaagttt
ttgaaaattactgaccgtaaaaaagaaatttttaaaactgctggtggtaaatatgttgca
ccacaaatgttggagaataaatataaagaatcggtattgattgaccatattatggtactg
ggtgaaaaccgtaagtttccgtctgcgttaattgtaccaaactttgaagccttaaaatca
tggtgtactaaaaaagggattacctatactactgatcatgaaatggttcagaatacccag
gtccttgaaaaatacaaccaggaaattgttaacggatctaaagattttggtaaatgggag
caggtaaagcgctttgtactacttactaaagcatggagcattgaagggggtgagtttacg
cctaagttaagtttgaagaggaaaattatcctagagaagaataaagagttaattgagaaa
atgtataaggacgcagcggactataaatctgaaaaacatgaatag
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