KEGG   Pedobacter cryoconitis: AY601_4682
Entry
AY601_4682        CDS       T04341                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00061  Fatty acid biosynthesis
pcm00071  Fatty acid degradation
pcm01100  Metabolic pathways
pcm01212  Fatty acid metabolism
pcm02024  Quorum sensing
Module
pcm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    AY601_4682
   00071 Fatty acid degradation
    AY601_4682
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AY601_4682
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pcm01004]
    AY601_4682
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcm04147]
    AY601_4682
Enzymes [BR:pcm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     AY601_4682
Lipid biosynthesis proteins [BR:pcm01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   AY601_4682
Exosome [BR:pcm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   AY601_4682
  Exosomal proteins of breast cancer cells
   AY601_4682
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: AMQ01512
UniProt: A0A127VJR7
LinkDB
Position
5461057..5462841
AA seq 594 aa
MPVTVTRVFDLLKYNLEKFPKDEFISGKSNGVWKKYSTQQFSTTADNLSKGLLQLGMGKG
DRIAVMSHNRPEWNIADFAVNQFGGYHVPLYPTLAEHDIKFILENAGVSVLFVEDETLFK
KVKPIGEAVNPDLKIYTFNEVPGANHWSLLIDAGAKSEGIELETYRAAVTPDDVLTLIYT
SGTTGTPKGVMLTHNNLVQNFINSAVVVPQGLENALSFLPLSHIFERMIVYLYLYMGVAV
YYAESMDTIVADIQSVKPNAFSTVPRLLEKVYDKIMEKGKALTGIKKGIFFWSVALAEQY
DMKSGWFYNFKLGIARKLVFKKWQEALGGNIVVIVSGGAALNPRLARIFWAAGMPVFEGY
GLTETSPVITVNHFDNAMFGTVGPVIDGVEVKIAADGEVLTRGHNVMKGYYKREDLTAEA
IDKDGWFHTEDIGELVNGKFLKITDRKKEIFKTAGGKYVAPQMLENKYKESVLIDHIMVL
GENRKFPSALIVPNFEALKSWCTKKGITYTTDHEMVQNTQVLEKYNQEIVNGSKDFGKWE
QVKRFVLLTKAWSIEGGEFTPKLSLKRKIILEKNKELIEKMYKDAADYKSEKHE
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcctgtaactgtaacaagagtatttgatttacttaaatacaacttagagaaattccca
aaagacgagtttattagtggaaagagtaatggggtatggaaaaaatatagcactcagcaa
ttttcaactactgcagataacctgagtaaaggcttactgcagctggggatgggtaaaggt
gataggatagctgtaatgtcccacaacagaccagaatggaatattgcagattttgctgta
aaccagtttggcggataccatgtgcctttgtatcctacactggctgagcatgatattaag
tttattctggaaaatgcaggtgtaagtgtattgtttgttgaagatgaaacattattcaaa
aaggtaaagcctattggtgaagctgttaatccagaccttaagatttatacttttaacgaa
gtcccaggtgcaaatcactggagtttactgatagatgcaggtgcaaagagtgaaggaatt
gagctggaaacttaccgtgcagctgtcacccctgatgatgtgctgactttgatctatact
tctggtacaaccggaacgccaaaaggtgttatgctgacgcacaataacctggttcagaat
tttataaattctgctgttgttgttccgcagggtttggaaaatgcactcagctttttgccg
ttatcccatatttttgagcggatgattgtctacctctatctctatatgggggtcgctgtc
tattatgcggagagtatggatactattgtcgcggatatccagtccgttaaaccaaatgct
ttttctaccgttccacgattactggaaaaggtttatgataaaatcatggaaaaggggaaa
gcgcttacagggattaaaaaaggtattttcttttggtcagttgcgcttgctgaacaatat
gatatgaaaagtggctggttttacaactttaaactggggattgccagaaaactggtcttt
aagaaatggcaggaagctttgggtggaaatatcgtagtgattgtttctggtggtgctgca
ttaaacccacgcctggcacgtattttctgggcagcaggaatgcccgtttttgaaggttat
ggcttaacagaaacttcaccggtgattacagttaaccatttcgacaatgccatgtttggt
actgtcgggcctgtgatcgatggggtcgaagttaagattgccgctgatggagaagtgctg
accagaggtcataacgttatgaaaggctattacaaacgggaagatctgactgctgaagct
attgataaagacggttggtttcatactgaagatattggggaactggtcaatggaaagttt
ttgaaaattactgaccgtaaaaaagaaatttttaaaactgctggtggtaaatatgttgca
ccacaaatgttggagaataaatataaagaatcggtattgattgaccatattatggtactg
ggtgaaaaccgtaagtttccgtctgcgttaattgtaccaaactttgaagccttaaaatca
tggtgtactaaaaaagggattacctatactactgatcatgaaatggttcagaatacccag
gtccttgaaaaatacaaccaggaaattgttaacggatctaaagattttggtaaatgggag
caggtaaagcgctttgtactacttactaaagcatggagcattgaagggggtgagtttacg
cctaagttaagtttgaagaggaaaattatcctagagaagaataaagagttaattgagaaa
atgtataaggacgcagcggactataaatctgaaaaacatgaatag

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