Phanerochaete carnosa: PHACADRAFT_122027 Help Entry PHACADRAFT_122027 CDS       T03128                                  Name (RefSeq) hypothetical protein   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism pco  Phanerochaete carnosa Pathway pco03018   RNA degradation Brite KEGG Orthology (KO) [BR:pco00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PHACADRAFT_122027  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pco03000]     PHACADRAFT_122027    03019 Messenger RNA biogenesis [BR:pco03019]     PHACADRAFT_122027    04121 Ubiquitin system [BR:pco04121]     PHACADRAFT_122027 Enzymes [BR:pco01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      PHACADRAFT_122027 Transcription factors [BR:pco03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     PHACADRAFT_122027 Messenger RNA biogenesis [BR:pco03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      PHACADRAFT_122027   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      PHACADRAFT_122027 Ubiquitin system [BR:pco04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     PHACADRAFT_122027 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-RING_4 RRM_1 Prok-RING_4 SET_assoc zf-C3HC4_3 zf-UDP Baculo_IE-1 Motif Other DBs NCBI-GeneID:  18907924 NCBI-ProteinID:  XP_007396273 JGI:  Phaca1_122027 UniProt:  K5WZN1 LinkDB All DBs Position Unknown AA seq 1335 aa AA seqDB search MDISDVNFKPCPCGYQICRFCWHHIKENLNGRCPACRREYTDDAVQFKPINKEDHKRLTQ QKKQRERERKELDALGRRHLANVRVVQRNVVYVVGIGPRFAKEELIPTLRSHEYFGQYGK ISKIVIVKRTSPGGRAPVVGLYITFHRREDAARCIAAVDGAPSPGASGEVMRASYGTTKY CMTFLRGASCPDHSCMSLHEWGDENDCFTKEDLTTLKHTMKDTESRARTITIVKKGEDAE GLPRAASWANKPPTTVANTALQNHTNAMQSVAARQQRRIGSTSAASTTTPATRQQKISSI ANNASISSTKKAVAAKSPSLASFSRPATPVLPGITASIKASKQKDTPSTTAAAARPASPA TAEPESKPSPEEPSRASSPPGSEPLSPEPTSALPTAPPGLPTLPPGLSAPPGLPPPSHTP ISTDSSPQIPMQMPQGPYQMSTAAQALIEDLRARRENTLVVNVPNPFPEFDRMMQSLAGD NSFSFSLDPKLAADTEDVALPDFQTEGAKPFGGSFFDAFPGVRQPPPPGLGFPQLGGSRD RIGTPSSSYSGSFNPFGNDLAEEPSQQYPPLDEERKVSRFGFARGRQGSAASTSASSPLH ASASLNHSESFSQAAYFAHSEVMSPPLAHPSPSQWSYTSRHHDYLNQSASAMSSPLAQHA QAHHPYEQAARYQQGFDTSVSEAQLRDFINSSRDRAARTATVDPNSFKFSGSQSFSDPAI MSARLASPAVAQPIHESGYANVQPPMESYQQQQQQLAYGPPPGLAYPPGIMPGPTMRHGL GLGAVPSAVELAQAGGSAHALYTVPASPSPVIPSPVLSSSDFPALSAPESTPNIDQQQPA DSSEPTTPLTETKAQSRAERAAAKKKAAAEVSATKAAAKAAEKERLASQKAAKEKAAALQ KAAEREKAAREKAEREEKERLEREKAERVAERATAAKAEREKVEVEKAEKEKMEKERVEK EKVEKAGAAKAAAKTGKLAEAESISQTSMPAQASKPPSRRDTNAKQPSTPVLSSAVPVVQ APILARLPKKTKPNAKPIKIPKEDSLNDVSSAIASATASEAPQLPEVRNESSSSSSRAHS EDRTHSEPRSLEEFLAEIDVQVPWIRLARHPFFDITKINPASKLPLEYGPLVHALSALSV GGGSFANTMPSGSIDNAVSSFQQLLETLTQTISDLLRLLPRTTWDDSSSFDGVLRDMLKG DDFLEDGGEEPAPQGKEDEVAALTMALERRARWMEVQLSKLEELHRDINNAAVRAVLTFN DNGWDLHGFMPRMGDTLTRFENLGKVFEGKVARDMTADELERELALAKESVAHAETELRD MMQSLQVVKPSDEDV NT seq 4008 nt NT seq  +upstreamnt  +downstreamnt atggatatctcagacgtcaacttcaagccttgcccttgtggttatcagatatgccgtttc tgctggcaccacatcaaggaaaatctgaacgggcgttgcccagcatgccgacgtgagtac accgacgacgctgtgcagttcaaaccgatcaacaaggaagatcataagcgcctgacgcag cagaagaaacaacgggagagggagcggaaagagcttgatgcgctgggccgccgccatcta gcgaacgtgcgagttgttcagagaaacgtcgtatacgttgtcgggatcggcccgcgcttt gccaaagaagagcttattccaacgctccgctcacacgaatactttggccaatatggaaag atctcgaagatcgtcattgtcaaacgtacctctcctggtggacgtgcgcctgttgtcggg ctgtacatcacgttccatcgccgagaagacgcggcgcgctgcattgccgctgtagacggt gcgccatctcctggggcaagcggggaagtcatgcgagctagttatggaacgacaaagtac tgcatgaccttcttgcgtggcgcaagttgcccagaccacagctgcatgagtcttcacgag tggggagacgaaaacgattgtttcacgaaagaagaccttacgacgctgaaacacaccatg aaggacacggagagcagggcgcggacaattacaattgtcaaaaagggagaagacgcggaa ggcctcccgcgcgccgcgtcatgggctaacaaacctcccacgactgttgcaaatactgcg ttacagaatcataccaacgcaatgcaaagcgtggcggcccgtcagcaacggcgaattggg tcgactagcgcagcgtccactaccactcctgctacgcgtcagcagaaaattagctccatc gctaacaatgcatcgatatcaagtacgaagaaggcagttgctgcgaagtccccatcgcta gcttcgttctctcgacctgcgacgcccgtcctaccgggtattacagcaagcattaaggca agtaaacagaaggacacaccttcgacaactgcagccgctgcgcgtccagcctcgcctgcc actgctgaacctgaaagcaagccttcaccggaagagccttcgagagctagctctccaccg gggtcggaaccgttatcaccagagcccacgtctgcattgccgaccgcacccccaggactc ccaactctacctccggggttgtctgcacccccaggcctgccaccaccatcgcatacaccc atctccacggattcgtcaccgcagatacccatgcagatgccgcaagggccataccagatg tccacagccgcgcaagcactcatagaagatcttagggctcgtcgggaaaacacattggtc gtaaatgtgccgaatccgttcccggaatttgatcgtatgatgcagtctttggcgggggac aacagcttcagtttcagtctagatcccaaacttgctgcagacactgaggatgtggcgctc cctgacttccagacggagggagcgaaacccttcggcggttcgttcttcgatgccttcccc ggcgtcagacagccaccaccacctggacttggcttcccacagctcggaggttctagagat cgcatcggcacacctagttccagctacagcggctcgttcaacccgttcggtaacgatctg gcagaggagccatctcaacaatatccgccgttggacgaggagaggaaagtgtccagattc ggctttgccagggggcgtcaaggctctgctgcgtcgacaagcgcctcgtctcctttgcac gcttcggcgtcactgaatcactcggagagcttttcgcaggcggcgtactttgcgcattcg gaagttatgtcgcccccactcgcccacccgagtccatcgcaatggagctacacttcacga catcacgactatctgaaccagtccgcttctgcaatgagctcccctcttgcacagcacgct caggcgcaccatccatacgaacaggccgcacgatatcaacagggattcgacacgtctgtc agcgaggcccaacttagagacttcatcaattcgagccgcgaccgtgcagctcgcacggcc accgttgatccaaatagcttcaagttcagtggcagccagtctttcagcgaccctgcaatt atgtcggctcgactagcttctccggcggtggcgcagccgatacacgagagcggctacgca aacgtccagcctccaatggagagttatcagcagcaacagcaacagttagcttacggacca ccacctggtcttgcctatcctccaggtatcatgcccggccctaccatgcggcacggacta ggacttggagctgtaccatcagctgtagagctggctcaagccggtggatctgctcatgcc ttatacacagtccccgcttcgccttcacccgtcattccatcccccgttctctcgtcttca gacttccctgctctctctgctcccgaatccacccccaatatcgaccaacagcagcccgcc gatagctcggagcctaccacacccctcacggaaaccaaggcccagtccagggcggagcgc gcggcagcgaagaagaaagccgccgctgaggtgtctgctacgaaggccgctgcaaaggct gcagaaaaggagcggctcgcttcgcagaaggccgccaaagaaaaggccgctgctttgcag aaggcagcagagagggagaaagcagccagggagaaggccgagagggaagagaaggagcgt cttgaacgagagaaagccgagagggtggctgagagagccaccgctgcgaaggctgagcgc gaaaaggtcgaggtggagaaggccgagaaagagaagatggagaaggaaagggtcgagaag gagaaagtggagaaagcaggggcggcgaaggcagcggcaaagactggcaaacttgctgaa gccgagagcatctctcaaacctctatgcccgctcaggcctctaagccgcctagccgtcgt gacactaacgcgaagcaaccctcgaccccggtactctcgtccgctgtgcctgtcgtccag gcacccatcttggccaggttgcccaagaagaccaagccgaatgcaaagcccatcaagatc ccgaaggaggacagcttgaacgatgtctcctccgcgatagcttccgcaactgcgtccgag gcaccccagctccccgaagtccgaaacgagtcgagctccagcagctcgcgtgcgcactct gaggacaggacgcacagcgagccgagatcgctcgaggagtttcttgccgaaatcgacgtt caagtgccatggatacgtctggcgcggcatccgttcttcgacataacgaagatcaatcct gcttccaagctgccactagaatatggccccctcgtccacgccttgtccgctctttccgtg ggcgggggctccttcgcgaataccatgccctctggctctatcgacaacgctgtctcctcc ttccagcagcttctggagacactgacacagaccatctccgaccttctccgtcttctgcct cggaccacatgggacgacagctcttcttttgacggtgtgttacgcgacatgctgaagggt gacgattttctggaggatggtggcgaagagcctgcaccgcagggcaaggaagacgaggtg gccgcgctcaccatggcccttgaacgacgcgcccgctggatggaggtacagctctcaaag ctcgaagaactgcatcgtgatatcaacaacgcggccgtccgggcggtgctcacgtttaac gacaatggttgggacttgcacggcttcatgccgcgcatgggtgacacgctaacacgcttc gaaaacctcggtaaggtttttgagggcaaggtcgcgcgggacatgaccgcggacgaactg gagagggagctggcacttgcgaaggagtcggtggcgcatgcggagacggagcttagagac atgatgcagagcctgcaggttgtgaagccgtcggatgaggatgtctaa

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