Phasianus colchicus (Ring-necked pheasant): 116230405
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Entry
116230405 CDS
T07365
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04510
Focal adhesion
pcoc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116230405 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116230405 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
116230405
NCBI-ProteinID:
XP_031451387
Ensembl:
ENSPCLG00000007578
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MGGVGGRRALPRVLALLAVLALPRGGGAAMDECTEERSGRPQRCMPEFVNAAFNATVVAT
NTCGTPAEEYCVQTGVTGVTQSCHLCDASQPHLRHGASFLTDYNSQADSTWWQSQSMLAG
VQHPAAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTY
NKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTA
TDIRVSLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIRNELGKLVCN
CKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGH
CSGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEK
CDRCQPGFHSLSEAGCRPCSCNPAGSTGECNMETGRCTCKDNVEGFHCERCKPGFFHLDP
SNPRGCTPCFCFGHSSVCTNAVGYSMYSITSSFQFGEDEWHAEQRDGSQVPLQWSSETQD
ISVISDSYFPIYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSV
PLIAQGNSYPSESPLTYTFRLHEAADYPWRPALSAFDFQKLLHNLTAIKIRGTYSERSAG
HLDDVTITSAVPGAGVPAAWVESCSCPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCTC
NGHSETCDPETGMCDCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVPR
TKEVVCTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQT
GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACHCNPYGTVNQQTSCNQVTGQCE
CLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTGQRCD
RCEANHFGFGPEGCKPCDCDPEGSRALQCREDGRCECKEGFVGNRCDQCEENYFYNRSWP
GCQECPACYRLVKDKVAEQRERLRELENLIANLGMGEETVTDQAFEERLKQAERDVMELL
REAQNSKDVDQGLMDRLRDINSTLTSQLSRLRNIQNTVQETENLAEQARGRVEDTEDLIA
MASDMLEKAKMAAGNVSITPPESSGDPNNMTLLAEEARRLAERHKQEADEIVRIAKAAND
TSTEAYQLLLKTLAGENQTARDIDELNQKYNQARNISRDLERQASSVLEEAEEAGNKALQ
IYANLTNLPTVDTTGLESEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLE
KGKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEE
ALKKIPAITQTIAEANNKTRQAELALGNAAADAREAKTRADDAEKIASAVQKSAAATRAE
ADKTFSDVTGLAKEVDDMMKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAEDNARKA
KNSVNSLLAVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVAFLEREAR
KQDDAIQSYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgttggcgggcggcgggcgctgccgcgggtgctggcgctgctggccgtgctg
gcgctgccccgcggcggcggcgcggcgatggacgagtgcacggaggagcggagcgggcgg
ccgcagcgctgcatgcccgagttcgtcaacgccgctttcaacgccacggtggtggccacc
aacacgtgcggcacgccggccgaggagtactgcgtgcagaccggcgtcaccggcgtcacc
cagtcgtgccacctgtgcgacgcctcccagccccacctgcggcacggcgcctccttcctc
accgactacaacagccaggccgacagcacctggtggcagagccagagcatgctggccggc
gtgcagcaccccgccgccgtcaacctcaccctgcacctcggaaaggcctttgacatcaca
tacgtgagactgaagttccacaccagcaggccagagagcttcgccatctacaaacgcaca
cgggaggacggcccatgggtgccctaccagtattacagtgggtcctgtgagagcacctat
aacaaagtcaaccgaggctttattcggactggggaggacgagcagcaggcgctctgcacg
gatgagttcagtgacatctcccccctcactgggggcaacgtggctttctcaacgttggag
ggacgtcccagtgcctacaactttgacaacagccctgtgctgcaggaatgggtgacggcc
actgatattcgggtgagcctcaaccgcctcaacaccttcggagatgaagttttcaatgac
cccaaagtcctcaagtcgtattactacgcgatttctgattttgccgtgggtggtagatgc
aaatgcaatggccacgcgagtgagtgcataaggaacgagcttgggaagctggtctgcaac
tgcaagcacaacacctttggggacgactgtgagaagtgccttcccttcttcaatgaccgg
ccgtggaggagagcaacagcagaaagtgccaacgagtgcttgccttgtgactgcaatggg
agatcacaggagtgctacttcgaccccgagttgtaccgctccaccggccacggcgggcac
tgctctgggtgccgggacaacaccgacggcgcccactgcgagaggtgcagggacagcttc
taccgccttgggagtgaggagggctgcctgccctgcagctgcaaccccgtgggctctctc
agcacgcagtgtgatagctatggccagtgcagctgcaaacctggtgtcatgggagagaaa
tgtgaccgctgccagccgggcttccactccctctctgaggctgggtgcaggccctgttct
tgcaatcctgctggcagcacaggtgaatgcaacatggaaacaggacggtgtacttgcaag
gacaacgttgagggcttccactgtgagagatgcaaacctgggtttttccatctggatccc
tcaaatccaagaggctgtaccccctgcttctgttttggacactcttcggtttgcaccaat
gccgttggctacagcatgtacagcatcacctccagctttcagtttggagaggatgagtgg
catgctgagcaacgtgatggctcccaagtgccactgcagtggagttcagagactcaggac
atctctgtcatctcggacagttacttccccatctattttgttgcaccacgcaaattcttg
ggcaaccaagttttgagctacggtcagaatctgaccttctccttccgtgtggacagacgg
gacacacgtctctctgcagaggacctggtgctggaaggggccgggctgcgtgtgtcagtg
cctctcattgcccagggcaactcgtaccccagtgagagcccactgacttacaccttcagg
ctccatgaggctgccgattacccgtggaggcctgctctctctgcattcgacttccagaag
cttctccacaatttgactgccatcaagatccgtggaacatacagtgagagaagtgccggc
cacctggatgacgttaccatcaccagtgctgtcccaggggctggcgtgcccgcagcgtgg
gtggagagctgctcctgccctgcaggctatgaggggcagttctgtgagcgctgctccccc
gggtaccgccgagagacccctggtttgggaccctacagcccctgcgtgccttgcacctgc
aatgggcacagcgagacctgtgatcctgagacaggcatgtgtgactgcagggataacact
gcgggctctcactgtgagaagtgcagtgatgggtactatggagatgcgacagcgggcaca
gccttggactgccagccctgcccgtgtcctggtggctccagctgcgctgtcgtgcctcgc
acaaaggaggttgtgtgcaccagctgccagacaggcaccacaggcaagaggtgtgagctg
tgtgatgatgcctactttggagacccgctgggtgaaaatggggctgtgaggccgtgccgc
ctgtgccagtgcaacgacaacatcgatcccaacgctgtgggcaactgcaaccggcagaca
ggagagtgcctcaagtgcatctacaacacggccggcttctactgcgaccgctgcaaggat
ggcttcttcgggaaccccctggcccccaaccctgctgacaagtgccgggcttgtcactgt
aatccctacggcaccgtgaatcagcagacgagctgcaatcaagtgacagggcaatgtgag
tgcctttcccatgtcactgagagggactgcagtgcctgcgagcccggcttcttcaacctg
cagagcggccgaggctgtgagaggtgtgactgccatgctctgggctccaccaacggccaa
tgtgacatatggacggggcagtgtgagtgccagcccggcgtcactggccagcgctgcgac
cgctgcgaggccaaccactttgggttcggtcctgagggctgcaaaccatgcgactgtgac
ccggagggctcacgtgccctgcagtgccgtgaggatggtcgctgtgagtgcaaggagggc
tttgtggggaaccgctgcgaccagtgcgaggagaactacttctataacaggtcatggccg
ggctgccaggagtgccctgcgtgttatagattagtgaaagataaggtggcagagcaacga
gagaggctccgggagctggaaaaccttatagcaaacctgggcatgggagaagaaactgtc
actgatcaagccttcgaggagaggttgaagcaggcagaaagagatgttatggagctgctc
cgagaggcacagaacagcaaagacgtagatcagggtctcatggatcgtctcagagacatc
aacagcacgctgacaagtcagctcagcaggctgaggaacatccagaacacggtgcaggag
acagagaacctggcagaacaagcccggggccgggtggaggacacagaggacttaattgca
atggcttctgatatgttggagaaggcaaagatggcagctggcaacgtgtccattacaccc
ccggagtcgagtggtgaccccaacaacatgactctattggcagaagaggcacgccggctg
gctgagaggcacaaacaagaagctgatgagattgttcgcattgccaaggcagccaatgat
acttccacagaagcctatcagctgctgctgaagaccctggctggggaaaaccaaacggca
cgtgatattgatgagctcaaccagaaatataaccaagcaagaaacatttctcgagatcta
gagagacaggccagcagtgtgcttgaggaggcagaggaagctggaaataaggccctccag
atctatgctaatctcaccaatctgcccacagtggacaccacagggctggagagtgaagca
aataagatcaagaaggaagcggaggagttagatcagttaatagcaaggaagctgaaggac
tatgaagacctgagggaagacatgaaaggaaaggagctggaagtcaagaacctcttggag
aaagggaagacggagcagcagactgcagaccagctcctagctcgagcagatgcagcaaaa
gccctggctgaggaagctgctcggaagggcaatggcacactgcaggaggccaataccatt
ctcagcaacctgaaagatttcgataagcgggtgaacgacaacaagacagcagccgaggag
gctctaaagaagattcctgccattacccagaccattgctgaagccaacaacaagacccgc
caggcagagctggctcttggcaatgctgctgctgatgcccgtgaagccaaaactagagca
gatgatgccgagaaaattgccagcgctgttcagaagagtgctgctgctaccagagcagaa
gcagacaagaccttctctgatgtgacgggtctggccaaagaggtggatgacatgatgaag
caactccaggaggcagaaaaagagctgaagcgtaaacaagatgatgctgatcaggatatg
atgatggcaggcatggcctcacaggcagcccaggaggcagaagacaatgcaagaaaagcg
aaaaactctgtgaacagcttgcttgcagtcattaatgaccttttagatcaactaggccaa
ctggagacggtggacttgaacaaactgaatgagattgagggtaccctgaacagtgccaaa
gaccagatgaaagatagcgacctggaccagaaggtggctttccttgagagagaagccagg
aagcaagatgatgcgatacagtcctacaacagggacattgaggaaatcctgaaagacatt
agcaacctggaggacatcaggaagaccttgccatctggctgttttaacaccccgtccatt
gagaaaccctaa
DBGET
integrated database retrieval system