Phasianus colchicus (Ring-necked pheasant): 116233641
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Entry
116233641 CDS
T07365
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116233641 (CASC3)
03015 mRNA surveillance pathway
116233641 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116233641 (CASC3)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116233641 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
116233641
NCBI-ProteinID:
XP_031456527
Ensembl:
ENSPCLG00000009832
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSGDSAASPARSRSGSASPRPSHRPPRGAAGALSAGPR
GRGAESAAGGGAAKSAPQSECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELK
QDSNDSCESAAKAEKGDEKLDSKGAVTGERQSGDGQESTEPVENKVGKKAPKHLDDDEDR
KNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQEL
IALYGYDIRSAHNPDDIRPRRMRKPRFGSPQRDPNWSNERPNKPPRHQGTDSTSAPPRTF
TSRSSAGTGRMPPPRNYPRVGGYKETRPGYRASEVSVQHPSRNSEQGKQESGYRAKRVEQ
SPPREKSPEVEAVHVHGSPVKEEGALENQTDAVQPPPDRPIEKKSYSRARRTRVKAGDAG
KLADDVPALEAPATPKPIQAETSPPPAKSSNWESPVESSLDGLEQEMIQMNLTEQNWSPG
QSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMH
ISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPMANPGL
YPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQQAQS
QVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKVKERSST
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcggcgactccgccgccagccccgcccgctcccgctccggctccgcttcg
ccgcggccttcacaccgccctccgcgaggcgccgccggagctctgagcgccgggccgcgg
ggccgcggggccgagagcgccgccgggggaggggcggccaaaagcgctccgcaatccgag
tgtgaaagcgaggacggcatcgaaggcgatgctgtgctgtcggattatgaaagcgcagag
gactcggaggcagaggaagaggattacagcgaggaagaaagtgccaaagtggaactgaag
caggatagcaatgattcctgtgagtctgcagcaaaagcagagaaaggggatgagaaactg
gactctaaaggtgctgtaactggtgaaaggcaaagtggggacgggcaggagagcaccgaa
cctgttgagaataaagttgggaaaaaagctcccaagcacctggacgacgacgaggatcgg
aagaacccggcttacatcccacgcaaagggctcttctttgagcatgacctccgggggcag
acgcaggaggaggaggtcaggccaaagggtcggcagcgaaagctgtggaaggacgagggc
cgctgggagcacgacaagttccgggaggacgagcaggcccccaaaaccaggcaggagctg
attgcactgtatggctacgacatccgctctgctcacaaccctgatgacatcaggccgagg
agaatgcgcaaaccgaggtttgggagcccccagcgagacccaaactggtccaacgagcgg
cccaacaaacccccacggcaccagggcacagacagcacttctgctcccccacgaaccttc
accagcaggagctctgcgggaacggggaggatgccccctcccaggaactacccgagggtg
ggaggctacaaggagacccgcccggggtaccgagcttcagaagtgagtgtgcaacacccg
tcccgaaacagtgagcaaggcaaacaggagagcggctatcgagcgaagcgtgtggagcag
agcccaccgagagagaagtcaccagaagtggaagcagtgcacgtccatggcagtcctgtc
aaggaggagggtgctctggaaaaccagaccgacgccgtgcagccgccgccagaccgacca
attgaaaagaagtcttattcccgggcaaggaggaccagagtcaaagctggggatgcgggg
aagctggcagatgatgtgcctgctctggaagctcctgcgacaccaaaacccatccaagct
gagacgtcccccccaccagcaaagagcagcaactgggagtcaccagtggaatccagcttg
gatggacttgagcaggagatgattcagatgaatctgacagagcagaactggagtccgggg
cagtctcagttcatacagccccgggagctgcggggtattcctaaccatatgcacgtggga
actgggccaccccctcagttcaacaggatggaggaaatggcggtgcagggcggccgtgtg
aagcgctactcctcgcagcggcagagaccgccagtgccagagcctgccccccccatgcac
atcagcatcatggaggggcactactacgacccactacaattccagggaccaatctacacc
cacagtgagaacccagccccgctgccgccccaggggatgatcgtgcagccagaaatgcat
ctccctcatccaggtttacatccccaccagacagcagccccgatggcaaaccctgggctc
taccctccgccggtctccatgcccccagggcagcccccgccgcagcagctgctcgccccg
acttacttctccccgcctggagtcatgaattttgggaatcctggctacccgtaccccccg
ggagcgctgcccccgccgccccctccacacctctattccaacacacagcaggcgcagtcc
caggtgtacgggggggtcacgtactacaacactgtccagcagcaagtgcagcccaagccc
tcaccaccacggaggacatcccagcctgtcaccatcaaaccgccgcctcccgaggacagc
aaaggtgagaaggtgaaggagaggagcagcacgtag
DBGET
integrated database retrieval system
