Phasianus colchicus (Ring-necked pheasant): 116237630
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Entry
116237630 CDS
T07365
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116237630 (RAI1)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116237630 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
116237630
NCBI-ProteinID:
XP_031462804
Ensembl:
ENSPCLG00000014589
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAAEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQAWGGQPPALPK
YEDSLMKKTSPAAGGRPYHEPAAAPLPFRTHFPQQQPQQPPALPYPKLQRQKLPNDVSSP
MPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPLGSAASLAPG
PRVPNLHGYQPNRIGYEQPPQPPPQPPPPPQPPQPPQPPQPQPQPLQGRHHAPESLHYQN
LAKYQHYNQAGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPN
LENFQYSQQPLNAGAFPAGITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLPKEKLPENLL
SDLSLQSLTALTSQVENISNTVQQLLLSKSAVPQKKGIKTPARTPEQLKGQHCSPESSTY
STEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQNRSPARVNSNSKAKP
ESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASE
IIVLQDAINEKEDKAWPNSPMLSKEATKSPFQLENHRPCLDSMVKGSWPSQGDSSTLTEP
LKLDKASGGSTGKDFGDEVYEGPQVEFAATETKDTLKDADPLAFNSKPSIPAATSSAGAS
GFSCYSNTTANSVGSENAMEHFEWPEENLGEACLRWKELGSGLQASDLPKGLFPSKLGGS
CKEKKNACSLDLCDGEQPAKSETTRDFGQQAMEEEEEETLTYDEATKVDSERWLQDTRHC
CTAGDFSEIPMISSPELKESDLEVEEYSSLCELAGTEQKSVPYAASPPKPPEIPAVLSAS
EVPMSAEETVSTIEKESSVPSARLSGQSIILLGPAVGTETKVKSWFKSSLPHIQPEEESG
GVEKSHPEAVDSEPVLSLGVKKQPAPENALVKTEPVSRGKNLRNKRIHCRLPEEDSAGNA
VPSPFSELPALCVGPDGQGEMLSKNVHSQTPRFAAEGLPARMCTRSFTALAEPRAPAPLE
GLKAPMHQEKLGKKPACGVKQRVAFKARKRSGRPAPKVIQSAGGDATITVSSLVPPEEVV
GPGPTDGDVADGGEKDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKAPKKLISNN
HLPPAFKLTPPGSPHKEGKVGTRMKLPKAGPGVGGKMSERPLHSLKRKSTFISPIPAKKR
NLVLRSNSGGVKEEKPEGPHSLFKKMPVAKKVKAKLPPKSPGEAVPKPPPVKEAPDVCIK
ITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTCKTAAAATVAATYSTSLS
VAGTERERAVKHGIVAPAVGDARLPKPAAAQKAPTVPPAEQFCRNPHGRALKGKPGSGKK
LSADGSQSEGCVQAAGAQPGSAMAAKNMALLPKKRNRKGKAAALGMAKAPLGPALPLSPR
ERAAGPGGGDEGKKPKSEEKEAAGSEGPTAGGTARGTKPRANHANYNGYSKRQRKRLGHG
KAKAVPVRCKNRGKRRRPAQQAPLPDPAEPEIRLKYISCKRLRADSRAPPFAPYVHVERR
GDFTTACTVINSPGDEARLQRGPSGTVPRPRAALPASSAMHLGPVVSKALSAACLVCCLC
RSPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAEGEEGGAAERPRGVAESGWAAGGRA
GRQEGAAEPGKPSVLRSSPRGVFRRLQSCYCCDERTEGEEAAEKPRRHECTKAESPPQPE
PAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSSCQQAGATVGCCQKGC
PHTYHYACAVDTGCLLTEESFSLRCPKHKVSPEPSCFSSCLQPMREVDLLSDLVTMSART
SHSPAQPLPVSA
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccatacgcgggc
tatgagaacagcgccgcggagaaataccaccggggaaacaagcaattagcagggcagcag
ctgcaaggcaggccggccttttccaattacgctgtgcaggagaacagcccttacccagcg
cgctattcgggggacgagagcctgcaggcgtggggcgggcagccaccagcgctgcccaag
tatgaggacagcctgatgaagaagacgtcgccggcagcaggagggcggccgtaccacgag
ccggcagcggctccactgcccttccggactcacttcccacagcagcagccgcagcagccg
cccgcgctgccctaccccaagctgcagcggcagaagctgcccaacgacgtctcctcgccc
atgcccttctcacagagcccccattttgggcagcactcacagtccttccccgcctcctcc
acctactcctctgtgccaggaggcagccagccggcacattcctacaagagctgcacagca
ccttcagggcagccgccgctggagcggcccctgggcagtgccgccagcctcgcccctggc
ccccgtgtgcccaacctgcacggctaccagcccaaccgcatcggctatgagcagcccccg
caaccgcccccacagcccccgccaccaccacagcccccgcagcccccgcagcctcctcag
ccccaacctcagcccttgcaggggaggcatcacgccccagagagcctccactaccaaaac
ttggccaagtatcagcattacaaccaagcggggcagacctactgccagggtgacgcaccg
cccgtccgcacgccggagcagtactaccaaaccttcagccctagcgccagccactcgccg
gcacgctccgtcggtcgctccccatcctacagctctacgccatccccgctcatgcccaac
ctggagaactttcagtacagccagcagcctctcaatgccggtgccttcccagccggcatc
actgaccacagccatttcatgccgctgctcaacccctctcccactgacgggacgagcccg
gatgctcaatctgggaattgcaagaatttgccgaaggagaaactgcctgaaaaccttctg
tcagatctgagcctgcagagcctgacggcactcacctcccaggtggagaacatctccaac
accgtccagcagctgctgctttccaaatcagccgtgccccagaaaaagggcatcaagacc
ccagcgaggacccctgagcagctcaaggggcagcactgcagcccagagagcagcacgtac
tccacagagcaggttgggaccccgctgtcggatccgctcagcaccccgcagtccgtccat
gccgagacacaggacgctgactatctgagcggctcggaggaccagctggagaggagcttc
ctgtattgcaaccagaaccgcagccctgcccgtgtcaacagcaactccaaggcaaagcct
gagtcggtgtccacatgctctgtcacctccccagatgatatgtccaccaaatcggatgac
tccttccagagcatccatgccagcctgcccctggagaccttcaccaagtacgtgaccaac
gagcgggactgtccccggctgctgctcagtgcgctgtcccaggaggagctggcctccgag
atcattgtcctgcaggatgccatcaatgagaaggaggacaaagcctggcccaactcaccc
atgttgagcaaggaggccacaaaatcccccttccagctggagaaccaccggccatgcctg
gactccatggtgaagggctcatggcccagccagggtgactccagcaccctcactgagccc
ctcaagcttgacaaggcttcggggggcagcacggggaaggactttggggatgaggtgtac
gagggtccccaggtggagtttgcagccactgagaccaaggacacacttaaggatgcggac
ccattggctttcaactccaagcccagcatcccagccgctacttccagtgcaggggcctct
ggcttcagctgctattcgaacaccacagccaactcagtgggctctgaaaatgccatggag
cactttgagtggccagaggagaacctgggtgaggcgtgcctcaggtggaaggagctgggc
tcgggtctgcaagcctctgacctccccaaaggcctcttccccagcaaactgggagggtcc
tgcaaggagaaaaaaaatgcttgtagcttggacctgtgcgatggtgagcagccggccaag
agtgagacgacccgggactttggccagcaggcgatggaggaggaagaggaggagacgctg
acctacgatgaggccacaaaggtggacagtgagaggtggctgcaggacacgcggcactgc
tgcacagctggggacttcagtgagattcctatgatctcatcaccagagctgaaggagtcg
gacctggaggtggaggagtactcctcactctgcgagctggcgggcacggaacagaagtcg
gtgccctacgctgcctcacctcccaagcctccagagatacctgctgtgctgtctgccagc
gaggtgcccatgtctgccgaggagactgtcagcacaatagagaaggagagttctgtgccc
tcggcgcgtctctccggtcagtccatcatcctgctgggcccggcagtgggcacggagacc
aaggtgaagagctggttcaaatcctccctgccccacatccagcctgaggaggagagtggg
ggagtagaaaagtcccacccggaagcagtggactctgaacctgttttgtcacttggggtg
aagaagcaaccggcacctgaaaatgcattggtgaaaacagagcctgtctcacggggcaag
aacctccgcaacaagaggatccactgccggctgccggaggaggacagtgctggcaacgca
gtgccgagccccttcagtgagctgccagcactgtgcgtggggccggacggacaaggggag
atgctgagcaagaatgtgcacagccagacgcccaggttcgcagcggagggcttgccagca
cgcatgtgcacccgctccttcaccgccctcgctgagccccgtgccccggcgccgctggag
gggctgaaggcaccgatgcaccaggagaagctgggcaagaagccggcatgtggtgtgaag
cagcgggtggctttcaaagccaggaagcgcagtggccggccagcccctaaggtcatccag
agcgccggtggtgatgccaccatcacggtgtccagcttggtgccgcctgaagaggtggtg
gggccagggccgacggatggggatgtggcagatggtggggagaaggaccagcgctcgatg
atcctgcgctcccggacgaagacacaggaggttttctacaccaagaggcggcggggcaag
cgggcggctgatgtccgactgaagaactgcaaagcacccaagaagctcatctccaacaac
cacctcccacccgccttcaagttgacccccccgggcagcccccacaaggagggcaaggtg
ggcaccaggatgaagctgcccaaggcggggccgggggtgggcggcaagatgtcagagcgg
cccctgcactcactgaagaggaagtccaccttcatctcccccatccccgccaagaagagg
aacctcgtcctgcgcagcaacagcggcggcgtgaaggaggagaagccggagggtccccac
agcctcttcaagaagatgcccgtggccaagaaggtgaaagcaaagctgccccccaagagc
cctggcgaagccgtccccaaaccccccccagtgaaggaggcccccgacgtctgtatcaaa
atcacctcgcgggcggccttccaggaggccaccaagaccaaagtgctccctccccgcaag
ggccgcggcctcaagctggaggccatcgtgcagaagatcacctcacccaacctgaagaag
ttcacctgcaaaacggccgcggcggccacggtggcggccacctacagcacctcgctgagc
gtggcggggacggagcgcgagcgggcggtgaagcacggcattgtggccccggcagtgggt
gacgcgcggttgcccaaaccggcagcggcacagaaggcgcccaccgtgccaccggctgag
cagttctgccggaacccccacggccgagcgctgaaggggaaaccgggcagcgggaagaag
ctctccgccgatggctcgcagagtgagggctgcgtgcaggctgcgggggcacagcctggc
tcagccatggcagccaagaacatggcgctgctgcccaagaagaggaaccgcaagggcaaa
gcggcggcgctgggcatggccaaggcacccctcggccccgcgctgccgctgtcgccccgt
gagcgtgcggccgggccgggcggtggggatgagggcaagaaaccaaagagcgaggagaag
gaggcggcgggcagcgaggggccaacggcgggtgggacggcgcgggggacaaagccccgg
gccaaccacgccaactacaatggctactccaagcggcagcgcaagcgtttgggccacggc
aaagccaaagcagtgccagtgcgctgcaagaaccgtggcaagcggcggcggccggcccag
caagccccgctgccggaccctgccgagcccgagatccgcctcaaatacatctcctgcaag
aggctgcgggccgacagccgggccccccccttcgctccctacgtccacgtagagcggcgc
ggcgacttcaccaccgcctgcaccgtcatcaactcccccggcgacgaggcccggctgcag
cgggggccctccggcaccgtgcccaggccacgggcagccctgccggcctcctccgccatg
cacctggggccggtggtgtccaaggcgctgagcgcggcctgcttggtgtgctgcctgtgc
cgcagccccgccaactacaaggacctgggtgacctgtgcgggccctactaccccgaggac
tgtctgcccaaaaagaagtcgcggctgaaggagaaagcgcgggcggagggcgaggagggc
ggcgcagcggagaggccccgaggggtggcagagagcggctgggcagccggcggcagggcg
ggcaggcaggagggtgccgcagagccgggcaaaccgagcgtgctgcgctccagcccccgg
ggtgtgttccgaaggctgcagagctgctactgctgtgacgagaggacagagggcgaggag
gcagccgaaaagccccggcggcacgaatgtaccaaggccgagtccccgccgcagcccgag
ccggcgggcgacacgcaggagcactggctgcacgaggcctgtgccgtatggaccgctggg
gtgttcctggtggcagggaagctctacgggctgcaggaggccgtcaaggcggctgccgac
ctgaagtgctcgagctgccagcaagcaggagccacagtgggctgctgccagaaggggtgt
ccccacacctaccactacgcatgtgccgttgacacaggttgcttattaactgaagagagc
ttctctctgagatgtcccaaacataaggtaagcccagagccctcgtgtttttcctcatgt
ctccagcccatgagggaggtggatctgctttcagaccttgtcaccatgtccgccaggaca
tcccactccccagcacagccactcccagtttcagcctaa
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