Phasianus colchicus (Ring-necked pheasant): 116237914
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Entry
116237914 CDS
T07365
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcoc03009
]
116237914 (IGHMBP2)
03012 Translation factors [BR:
pcoc03012
]
116237914 (IGHMBP2)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
116237914 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
116237914 (IGHMBP2)
Ribosome biogenesis [BR:
pcoc03009
]
Eukaryotic type
Other ribosome biogenesis factors
116237914 (IGHMBP2)
Translation factors [BR:
pcoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116237914 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Helicase_RecD
Viral_helicase1
ResIII
nSTAND3
DEAD
UvrD-helicase
AAA_16
AAA_22
Flavi_DEAD
AAA_25
IstB_IS21
SLFN-g3_helicase
AAA
ABC_tran
DnaB_C
PhoH
UvrD_C_2
NTPase_1
zf-ribbon_3
zf-UDP
Motif
Other DBs
NCBI-GeneID:
116237914
NCBI-ProteinID:
XP_031463199
Ensembl:
ENSPCLG00000018411
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MAEEVAERQLQLLREEREAELAEKRAWQENISLKELQRRGVCLLKLQAANQRTGLYGRLL
VTFQPRKCYSDTELPYNSFGPGDIVGLYDSVSQGDLLSTGIVTRITSKAVTVAFEESRDG
MLSVDHESLYRLLKLANDITYNRIKKALNALKQYHSGPASDLIDVLFFSSDPSPSSETKP
LKLYNDSLDASQREAVSFSLAQKELAIIHGPPGTGKTTTIVEIILQAVQQGLKVLCCAPS
NVAVDNLVERLAGYKARILRLGHPARLLEPIQQHSLDAVLAHSDSAQIVADVRKDIDQAF
AKSKKSQDKGERGHFLSEIKALRKELKEREETAMTAALTHANVVLATNTGASSDGPLKLL
PESYFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLME
RVIKRYGEKVVKMLTVQYRMHEAIMQWASSEMYGGQLTAHPSVAQHLLKDLPGVTCTEET
TIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLVGLHIKALVDAGVKAQDIAVVAPYNLQ
VDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNKKGEVGFLAEDRRINVAVTRA
RRHVAIICDSCTVGSQAFLARLLEHFRQHGQVRTAFEYLDDLVPENYSHRGERQQSTKAP
AAPSPKPQPAAGKKPKAAAAANATPQKQEAHCSPSTSRSGGESPGTKGDTNKFKAVLEAF
LESGKTQLDFPSSLSPHDRMLVHLLAEEHGLQHVSIGEGTDRYISVRKKELGQTVVAPPA
TPREQQHPPQPQDSSGEAPAPAEPGGRSEWSGKVDLKRLHLERVQREKARREEMVKKEQE
SSADNRGSSSRKKDKSECKGKAAAKTTTDSASEEDIDALISAAVKTDNTCGFPRCKASVT
TLGQFCPHCNRRYCLSHHIPEVHGCGDKAKAHARQWISREGILYPGSSPKERSLDPAKRA
HLQRRLDKKLSDLTNQRKSKKKGKEK
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggtggctgagcggcagctgcagctgctgagggaggagcgggaggcagag
ctcgccgagaaaagagcatggcaggaaaacatctccctaaaggaactgcagcgcagaggt
gtctgcttactaaaacttcaagctgccaaccagagaaccggcctctacgggcgtctgctt
gtgacatttcagcctagaaaatgttattcagacaccgagctgccctataacagttttggg
cctggtgacatagtgggcctttacgattcagtcagccaaggcgatctgctttccactggc
attgtaacacgtatcacctccaaagcagtgactgttgcctttgaggaatctcgagatggc
atgctgagtgtggatcatgagagcttgtaccgcctgctgaaattagccaacgatatcacc
tacaacaggataaaaaaagctttgaatgcactaaagcagtaccacagtggtccagcctct
gatctgattgatgtcctcttcttttcctcggatccaagcccatccagtgaaacaaagcct
ttaaagctctacaatgactcgttggatgcatcacagagggaggctgtttccttctcacta
gcacagaaagagcttgccatcatccatggacctcctggcacagggaagaccacaacaata
gtagagatcatcttgcaagctgtacagcaaggcctgaaagtcctgtgctgtgccccttcc
aatgttgcagtggataacctggtggaaagactggctggctacaaagcccgcatcctgcgg
cttgggcaccctgctcgcctgctggagcccatccagcagcattccttggatgcagtcttg
gcccacagtgacagtgcccagatagtggccgatgtcaggaaggacattgaccaggccttt
gcaaaatccaaaaagagtcaagacaaaggggagcggggccattttctcagcgagattaag
gcactgagaaaggagctgaaggaacgagaagaaactgccatgactgcagcccttacccat
gccaatgtagtccttgctacaaatacaggtgcttcttctgatggtccgctgaagctgctg
cctgagagttattttgatctggtcgtgatagatgagtgtgcccaagccctggaagccagc
tgttggatacctctgctgaaagctccaaagtgcatcctggctggggaccacaagcagctt
ccccctaccatcatctcccacaaggctgctgccaagggcctttcactcagcttgatggag
cgtgtcatcaagaggtatggggagaaggttgtgaagatgctgacagtgcagtaccggatg
catgaagccatcatgcagtgggcttcctcagagatgtatggtggccagctcactgctcac
ccatcggtagcccagcatctgctcaaggacctgccaggagtcacctgcacagaagagacc
acaattcccttactgctcatagacactgctggctgtggcctgttggagctggaagtggaa
gatgaacagtctaaggggaatccaggagaagtgcagctggttggtttgcacatcaaggct
ttggtagatgctggtgtgaaggcgcaagacatcgctgttgtagccccctacaacctccag
gtggacatgttaagagagcacctttgccacaggtaccctgagctagagattaaatcagtt
gatggtttccaaggcagagagaaagaggcagtgatcttgtcattcgtgagatccaacaaa
aaaggcgaggtgggttttcttgccgaggaccgacggatcaacgttgcggtgacgcgtgcc
cggcgtcacgtggccatcatctgcgacagctgcacggtgggcagccaggccttcctcgca
cggctgctggagcacttcaggcagcacggccaggtgcgcacggcctttgagtacctcgat
gaccttgtccctgaaaactactcccacagaggggagcggcagcagagcaccaaggcccct
gcagcacccagccctaaaccgcagccagctgcagggaagaaacccaaagcagcagcagca
gctaatgcaactcctcaaaagcaagaagcacattgctctcctagcacaagtagatctggg
ggggagagcccagggacaaaaggtgacacaaacaaatttaaagctgtgctggaagccttc
ctggagagtggcaagacacagttggacttcccctcatctctcagtccgcatgaccggatg
ctggtccacctcctggccgaggagcatgggctgcagcatgtcagcattggggagggcaca
gaccgctatatcagtgttcgcaagaaggagcttggtcagactgtggttgccccacctgca
acccccagggagcagcagcaccctcctcagccacaggactctagtggggaagctccagcc
cctgctgagccaggaggaagaagtgagtggtcagggaaagtggacctgaaaaggctgcac
ctggagagagttcagagggagaaggccaggcgggaggagatggtgaagaaagagcaggag
tccagcgctgacaatcggggcagcagcagcaggaagaaggacaaaagcgaatgcaaagga
aaagcagcagctaaaaccacaacagacagtgcatcagaggaagatatagatgctctgatt
tctgctgctgttaaaactgacaacacctgtggcttcccccgctgcaaagccagtgtcaca
acccttggccagttctgcccacactgcaacaggcggtactgtctcagccatcacatccca
gaggttcacggctgcggggacaaggccaaggcacatgctcggcagtggatcagcagggaa
gggattctgtaccctgggagcagccccaaggaaagatccctggaccctgccaagagagcc
catctccagcgccgcctggacaagaagctcagcgatctgaccaaccagcgcaagagcaag
aagaaaggcaaggagaagtga
DBGET
integrated database retrieval system
