Phasianus colchicus (Ring-necked pheasant): 116238905
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Entry
116238905 CDS
T07365
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04010
MAPK signaling pathway
pcoc04210
Apoptosis
pcoc04218
Cellular senescence
pcoc04620
Toll-like receptor signaling pathway
pcoc04621
NOD-like receptor signaling pathway
pcoc04622
RIG-I-like receptor signaling pathway
pcoc04623
Cytosolic DNA-sensing pathway
pcoc04625
C-type lectin receptor signaling pathway
pcoc04920
Adipocytokine signaling pathway
pcoc05132
Salmonella infection
pcoc05164
Influenza A
pcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116238905 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116238905 (NFKB1)
04218 Cellular senescence
116238905 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116238905 (NFKB1)
04621 NOD-like receptor signaling pathway
116238905 (NFKB1)
04622 RIG-I-like receptor signaling pathway
116238905 (NFKB1)
04623 Cytosolic DNA-sensing pathway
116238905 (NFKB1)
04625 C-type lectin receptor signaling pathway
116238905 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116238905 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116238905 (NFKB1)
05168 Herpes simplex virus 1 infection
116238905 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
116238905 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116238905 (NFKB1)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116238905 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
116238905
NCBI-ProteinID:
XP_031464691
Ensembl:
ENSPCLG00000013746
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MAGEDPYIMGVSDPQMFAMDQLMGMNTIFNNTGYITSDLPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNGGFTRRLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGAGGGGMFGGGGGGAGSGFSYPSYGYSAFGGMHFHPG
TTKSNAGMKHELSNSAVEKDEESSDKQSGRWDVKHDLKVETVEKNECRTSGHNDEKEDAS
LCCKDEGNKAKCGCQDGLFLEKAMQLAKRHCNALFDYAVTGDVRMLLAVQRHLTAVQDDN
GDNVLHLSIIHLHRELVKNLLEVMPDMNYNNIINMRNDLYQTPLHLAVITKQAEVVEDLL
KAGANVNLLDRHGNSVLHLAAAEGDDKILSLLLKHQKASSMIDLFNGEGLSAVHMVVIAN
SLSCLKLLIAAGVNVNAQEQKSGRTALHLAVEEENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGFTKLAAVLKAAGADPHIENFEPLFDVEEDVKDDDDEGIVPGTTPLDMAANWE
VYDILNGKPYIAAAAVSEDLLTQGPLRELNESSKKQLYKLLETPDPSKNWSTLAEKLGLG
ILNNAFRLSPSPSKTLLDNYKISGGTVQELIAALRQMDHTEAIEVIQNALSSSQSRSHQE
DNTIEAFASSSPANFAKGETGELHNHKFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSV
TLSKMTLGYGQESSVQSNYIPN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaggatccatatattatgggagtgtcagatccccaaatgtttgcaatggac
cagctcatgggaatgaatacaatatttaataatacaggctacatcacttcagatttacca
ctacgaacagcagatggaccgtatcttcaaatcattgaacagccaaaacagaggggtttt
cgattccgatacgtatgcgaagggccttcacatggtggacttcctggtgcttccagtgag
aagaacaagaagtcatacccccaagtcaagatttgcaactatgttggacctgcaaaagta
atcgtccagttagttactaatgggaaatacgtccacttgcacgctcacagcttggtgggt
aaattttgtgaagatggagtatgcacagtcaatgcaggaccgaaagacatggttgttggg
tttgcaaaccttggaatacttcacgtcacgaagaagaaagtatttgaaactctggaaaca
cgcatgattgatgcttgcaaaaaaggatacaacccaggactcttggtgcatcctgaactt
ggctatctgcaggcagaaggatgtggagacagacagctaactgaacgagaaagagaaatt
attcgccaggcagcagtacagcagacaaaagaaatggatctcagtgtggtgcgtcttatg
tttacagcctttcttcctgacagtaatggtggtttcacacggaggcttgatcctgttata
tcggatgcaatatatgacagcaaagcacccaatgcttccaacttaaaaattgtaagaatg
gacagaacagcagggtgtgtaacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggag
ggctttggggacttttctcctacagatgtacatagacaatttgctattgtgttcaaaaca
cccaagtatcgagatgtcaatatcacaaagccagcatctgtatttgtacaactacgtcgg
aaatctgatctagaaacgagtgaaccaaagccttttctctactatccagaaatcaaagat
aaagaagaagtgcagaggaagcggcagaagctcatgccaaacttctccgatggctacggt
ggaggcagcggcgcaggaggtggtggcatgtttggaggaggaggcggcggtgctggctct
gggttcagttatccttcctacgggtactctgcttttggaggaatgcatttccaccctggc
acaacaaagtccaatgctggaatgaaacatgaactgtcaaatagcgcagttgaaaaagat
gaagagagctctgataaacaaagtggcagatgggacgtgaaacacgatttgaaagtggaa
actgtagagaagaatgagtgcagaacctctggtcataatgacgagaaagaggatgcttcc
ttgtgctgtaaagatgaaggaaacaaagcaaagtgtggctgtcaggatggtctgttcctg
gagaaggctatgcagcttgccaagcgtcactgcaacgctctctttgattatgctgtaact
ggagatgtgaggatgttgctagctgttcagcgccatctcactgctgtccaggatgacaat
ggagacaatgtccttcatttgtcaattattcaccttcatagagaactggttaaaaacctc
ttggaagtgatgccggatatgaattataacaacattatcaacatgagaaatgacctttat
cagacccccttgcacctggcagtaatcacaaagcaggcagaggtggttgaagacttgctg
aaggctggagcaaacgtcaaccttttggatcgccatggtaattctgtcttacatttagct
gctgctgaaggagatgacaagattctgagtctgctcctcaagcatcagaaggcatcttca
atgattgaccttttcaatggcgaaggtctcagtgcagttcacatggtggtgatcgccaat
agcttgtcctgtctgaaactactgattgctgctggagttaatgtcaatgctcaggaacaa
aaatctggacgaactgcattgcatttagctgttgaagaagagaacatccccttggcaggc
tgccttttgcttgagggcgatgcagatgtggacagcactacatacgatggcacaactcct
cttcacatagcagctggaaggggctttacaaaactggcagcagttctcaaagcagcaggc
gcagatcctcacattgagaactttgagccactctttgatgtagaagaagatgtgaaagat
gatgatgatgaaggaattgtacctggaacaacgccactggatatggcagccaactgggag
gtgtatgacattttaaatggcaaaccctacatagcagcagcagcagtttcagaggattta
ctgacacaaggccctctgagagagctgaacgaaagctccaagaagcagctttacaagcta
ttggaaacacctgatccaagcaagaactggtctactctagcagaaaagctgggtcttggc
attcttaataatgccttcaggctgagcccttcaccttcgaaaactctgctagataactat
aagatttctggaggtacagttcaagagctgattgctgctttgagacagatggatcacacg
gaagctattgaagtaattcagaacgcactatctagttcacaaagtcggtctcaccaggag
gacaacacaatagaagcttttgcttcatcatcaccagccaattttgcaaagggagagaca
ggtgaacttcataatcataaatttcaagacactgaaagcacgtgtgacagcggggtagag
acctccttccgcaaactgagctttacttattcagactctctgaacagcaagtcatcggta
acacttagcaaaatgaccctgggctacggccaggaaagctcagtgcaaagcaattatata
cccaactag
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