Phasianus colchicus (Ring-necked pheasant): 116240203
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Entry
116240203 CDS
T07365
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03020
RNA polymerase
pcoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116240203 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
116240203 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116240203 (POLR2A)
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116240203 (POLR2A)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116240203 (POLR2A)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116240203 (POLR2A)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116240203 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_2
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
116240203
NCBI-ProteinID:
XP_031466403
Ensembl:
ENSPCLG00000013440
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
DLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGR
PLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIV
TPFNIDRYVAGGAVGGHLEGDVSPLLTVALPFEVSLWNLTVWVSGCLPMGLTVVSGCFQV
ERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLP
QSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMF
LSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDT
KVVVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGVG
FWCSLWDFGALGGILLPFWGFCSHFGFFSLLSWLLCPQSHPGLLQVIEKAHNNELEPTPG
NTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQ
QNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDT
AVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLK
PSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFERMREDREVLRVIF
PTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLS
RQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGAL
AAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARD
AERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPW
LLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQ
EEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKA
LQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDG
SYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDP
MKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSAIPGLGVGGSTGMFFGSAPSPM
GNMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPG
SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS
PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP
TSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPR
YTPQSPTYTPSSPSYSPSSPSYSPSSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT
SPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTY
SPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
NT seq
5165 nt
NT seq
+upstream
nt +downstream
nt
acgacctgacccacaagctggcagacattgtgaagatcaacaaccagctgcggcgcaatg
agcagaacggggcggctgcccacgtcatcgccgaggacgtcaaactgctgcagttccacg
tggccaccatggtggacaacgagctgcccgggctgcccagggccatgcagaagtcggggc
ggccgctgaagtctctgaagcagcggctgaaggggaaggagggccgcgtgcgtgggaacc
tgatggggaaacgcgtggatttttcggcgcgcaccgtcatcacccctgaccccaacctcg
ccatcgaccaggtgggggtcccacgctccatcgctgccaacatgaccttcgctgagatcg
tcacccccttcaacatcgaccggtacgtggctgggggggccgtggggggacacctagagg
gggacgtgtcaccacttctgactgtagctttgccttttgaggtgtctttatggaatttga
ctgtttgggtgtcagggtgtctccccatgggtctgactgtagtgtcggggtgtttccagg
tggagcgtcacatgtgtgacggtgacatcgtcatcttcaaccgtcagcccaccctgcaca
agatgtccatgatggggcaccgtgtgcgaatcctgccctggtccaccttccgcctcaacc
tcagcgtgacgacgccgtacaacgccgactttgacggggacgagatgaacctccacctgc
cgcagtccctggagacccgcgcggagatccaggagctggctatggtgccacgtatgatcg
tcaccccgcagtccaaccgccccgtgatgggcatcgtgcaggacacgctcaccgccgtgc
gcaagttcaccaagcgcgacgtcttcctcgagcgcggggaggtgatgaatctgctgatgt
tcctgtcgacgtgggacggcaaggtgccgcagccagccatcctcaaacctcgccccctct
ggacggggaagcagatcttctcactcatcatccctgggcacatcaactgcatccggaccc
acagcacccaccccgacgacgaggacagcgggccctacaagcacatctcccccggggaca
ccaaggtggtggtggagaacggggagctgatcatgggcatcctgtgcaagaagtctctgg
gcacgtcggccggctcgctggtgcacatctcctacctggagatgggccacgacaccacca
ggctcttctacagcaacatccagaccgtcatcaacaactggctgctcatcgagggtgtgg
gattttggtgctctctgtgggattttggtgctctcggtgggattctgctgccgttttggg
ggttttgctcccattttgggtttttctcgctcctctcttggcttctgtgtccccaatccc
accctgggctgctgcaggtgattgagaaggcccacaacaacgagctggagcccacgccag
gcaacacgctgcggcagacctttgagaaccaggtgaaccgcatcctcaacgacgcccgcg
acaaaaccggctcctctgcccagaaatccctgtccgagtacaacaacttcaagtccatgg
tggtctcgggggccaaggggtccaaaatcaacatctcccaggtgatcgccgtggtggggc
agcagaacgtggaagggaagcggatcccgtttgggttcaagcaccgcacgctgccccact
tcatcaaggacgactacggccccgagagccgcggcttcgtggagaactcctacctggcag
ggctcacccccaccgagttcttcttccacgccatgggcggccgcgagggtctgatcgaca
ccgccgtcaagacagccgagaccgggtacatccagcgccggctgatcaagtccatggagt
cggtgatggtgaagtacgatgccacggtgcgcaactccatcaaccaggtggtgcagctgc
gctacggggaggacgggctggcaggggagagcgtcgagttccagaacctcgccaccctca
agccttccaacaaagcctttgagaagaagttcaaattcgactacaccaacgagcgtgcgc
tgcgacggacgctgcaggaggagctggtgaaggacatcctcagcaatgcccacatccaga
acgagctggagcgggagttcgagaggatgcgcgaggaccgcgaggtgctgcgtgtcatct
tccccaccggcgacagcaaggtggtgctcccctgtaacctcctgcgcatgatctggaacg
ctcagaagatctttcacatcaactcacgcctgccctccgacctgcaccccgtcaaggtgg
tggaaggcgtgaaggagctgagccgtaagctggtgatcgtcaatggggaggaccctctga
gcaggcaggcgcaggaaaacgccacgctgctcttcaacatccacctgcgctccacgctct
gcagccgccgcatggtggaggagttcaggctgagcggggaggcgttcgactggctgctgg
gggagatcgagtccaagttcaaccaggccatcgctcaccccggcgagatggtgggcgcac
tggcagcgcagtccctgggggaaccggccacgcagatgaccctcaacaccttccactacg
ctggtgtgtcagccaagaacgtgacgctgggcgtcccacggctgaaggagctcatcaaca
tctccaagaaacccaaaactccatcgctcacggtcttcctgctgggccagagcgcccgcg
atgctgaacgtgccaaggacatcctgtgccgcctggagcacaccaccctgcgcaaggtga
cagccaacactgccatctactacgaccccaacccgcagagcacggtggtggccgaggacc
aggagtgggtcaacgtgtactacgagatgcccgacttcgatgtcagccgcatctctccct
ggctgctccgcatcgagctcgaccgcaagcacatgacggaccgcaagctgaccatggagc
agatcgccgagaagatcaacgctggttttggagatgacctcaactgcatcttcaacgacg
acaacgccgagaagttggtgctgcgcatccgcatcatgaacagcgacgagaacaagatgc
aggaggaggaggaggtggtggacaagatggatgacgacgtgttcctgcgctgcatcgagt
ccaacatgctgaccgacatgacgctgcagggcatcgagcagatcagcaaggtgtacatgc
acctgccccagacagacaacaagaagaagatcatcatcacagaggatggggagttcaagg
cactgcaggagtggatcctggagactgacggcgtcagtctgatgcgggtgttgagcgaga
aggacgtggacccggtgcgcaccacctccaatgacatcgtcgagatcttcactgtgttgg
gcatcgaggcggtgcgcaaggctctggagcgggagctgtaccacgtcatctcctttgatg
gttcgtacgtcaactaccgtcacctggccctgctgtgtgacaccatgacgtccaggggac
acctgatggccatcaccaggcacggtgtcaaccggcaggacaccgggccactcatgaagt
gctcctttgaggagacggtggacgtgctgatggaggcagcagcgcacggcgagagcgacc
cgatgaaaggggtgtcagagaacatcatgctgggacagctggcccccgctggcaccggct
gcttcgacctgctgctggatgctgagaagtgcaagcatggcatggagatccccagtgcca
tccccggcctgggagtgggcggctccaccgggatgttcttcggctcggcacccagcccca
tggggaacatgtcccccgccatgacgccctggaaccagggggccactcctgcctatgggg
cctggtcccccagtgtgggcagcggcatgacccccgggggggctggcttctcccccagcg
ctgcttcagacgccagcggtttcagccccggttactcacctgcctggtcacccactcctg
gctcccctggatccccagggccctccagcccctacatcccctccccaggtggggccatgt
cccccagctacagccccacatcacctgcctacgagccacgctcacctgggggctacaccc
cacagagccccagctacagccccacctctccgagctacagtccaacatcacccagctaca
gccccaccagccccaactacagccctacttcgccaagctacagccccaccagccccagct
acagcccaacctcgcccagttacagccccacttctcccagttacagccccacttctccaa
gctacagccccacctcgcccagttacagccccacttctccaagctacagccccacttctc
ccagttacagtcccacttctccaagctacagcccaacctcgcccagttacagcccgactt
ctccaagctacagcccaacctcgcccagctacagcccgacttctccaagctacagcccca
ccagcccgagctacagcccgacttcgcccagttacagccccaccagccccaactacagcc
ccacgtcccccaactacaccccaaccagtcccagttacagcccgacttctcccagctaca
gcccaacctctcccaattacaccccaacctcccccaactacagtcccacctcccccagct
acagtcccacctccccgagctacagccccacatctcccagctactccccctccagccccc
gctacaccccacagtcgcccacctacacccccagcagccccagctacagccccagcagcc
ccagctacagcccatcctcccccaagtacaccccaaccagcccctcctacagccccagct
ctcccgagtacaccccgaccagccccaagtacagccccacctcgccgaagtacagcccca
ccagccccaagtacagccccacctcgcccacctacagcccgaccacccccaaatacagcc
ccacctcgcccacctacagccccacctcacccgtttacactcccaccagccccaagtaca
gccccacctcaccaacctacagcccaaccagccccaagtacagccccacctcgcccacct
acagccccaccagccccaagggctccacctacagccccacatcaccgggctacagcccca
cgtcgcccacctacagcctgaccagcccagccatcagccccgacgacagcgacgacgaca
attga
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integrated database retrieval system
