Pseudomonas coronafaciens pv. oryzae: POR16_04825
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Entry
POR16_04825 CDS
T08147
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00300
Lysine biosynthesis
pcof00550
Peptidoglycan biosynthesis
pcof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
POR16_04825
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
POR16_04825
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_04825
Enzymes [BR:
pcof01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
POR16_04825
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Precursor biosynthesis
Amino acid ligase
POR16_04825
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
QGL55705
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Position
1082760..1084226
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AA seq
488 aa
AA seq
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MTLSLSKIFANHTDRDPLIRELTLDSRNVRPGDLFLAVPGIKADGRAHIADALKRGAAAV
AYEVEGSNVLPLTDVPLIPVKGLAAQLSDIAGRFYGDPSRRLNLVGVTGTNGKTSVTQLV
AQALDALGQRCGIVGTLGTGFYGSLQSGRHTTPDPIAVQATLTDLKKAGARAVAMEVSSH
GLDQGRATALAFDVAVLTNLSRDHLDYHGTMEAYGAAKAKLFAWPNLNCRVINLDDDFGR
QMAGLKQESRLITYSQLDSSAYLYCREAKFDDDGVRATLVTPQGEHFLRSSLLGRFNLSN
VLAAVGALLGLDYALDEILKVLPKLEGPVGRMQRLGGADKPLVVVDYAHTPDALEKVLEA
LRPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGICVTDDNPRNESSSQIFADIRPG
FTAADKVSFIEGRAQAIAELIAGASADDVVVLAGKGHEDYQEISGQRQPFSDLEEAARAL
AAWEAANA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgagtctgagcaaaattttcgctaatcataccgaccgcgatccactgatccgc
gagttgaccctggacagccgtaacgtgcgtccgggcgatctgtttctggctgtgccgggc
atcaaggctgatggtcgcgcgcacattgccgatgcgctcaagcgcggcgcggcggcagtg
gcgtatgaggtagaaggctccaacgtcctgccgctcactgacgtgccgctgattccggtc
aaggggcttgctgcgcagctttctgacatcgcaggtcgtttttacggcgatccaagccgc
aggctgaacctggttggcgtcaccggcaccaatggcaagaccagtgtcactcagctggtt
gcccaggcgcttgacgcactgggtcagcgctgcggcatcgtcggcacgctgggcaccggt
ttctatggttcgctgcaaagcggtcgccacaccacgcctgaccctattgcggttcaggcg
acgctgactgacctgaaaaaggccggcgcgcgagctgtggcgatggaagtgtcgtcccac
ggtctggatcagggacgggcgaccgcgctggcgttcgacgtggcagtgctgaccaacctg
tctcgtgatcatctggattatcacggcactatggaagcctatggcgctgccaaggccaaa
ttgttcgcatggccaaatctgaactgccgggtgatcaaccttgacgacgattttggccgt
cagatggctggtctcaagcaggaatcgcgtctgatcacctacagccagctggacagctcg
gcgtatctgtattgtcgcgaagccaaattcgatgacgatggcgtgcgcgccacgctggtt
acgccgcaaggcgagcattttctgcgcagcagcctgttgggccggttcaacctgagcaat
gtgctggctgcggtcggcgctttgctggggctggattacgcgctggacgaaatcctcaag
gtactgccaaaactcgaaggcccggtcggacgcatgcagcgtctgggtggtgctgacaag
ccgctggtggtcgttgactatgcgcacaccccggacgcgctggaaaaagtgctcgaagca
ctgcgccctcatgccaaaggtcgcttgctgtgcctgttcggttgcggtggcgaccgcgat
cgcggcaagcgtccgctgatggcggaagtggtcgagcgactggccgacggtatctgcgtc
actgacgacaaccctcgcaacgaatcatcttctcagatattcgccgacatccgtccgggc
tttacggccgccgacaaggtgagcttcatcgaggggcgcgcccaggccattgccgagttg
attgccggtgccagcgctgatgatgttgtagtgcttgctggcaaagggcacgaggactac
caggaaatcagcggccagcgtcagccgttttctgatcttgaagaagctgcccgagcgctt
gccgcgtgggaggctgccaatgcttaa
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