Pseudomonas coronafaciens pv. oryzae: POR16_04860
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Entry
POR16_04860 CDS
T08147
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00470
D-Amino acid metabolism
pcof00550
Peptidoglycan biosynthesis
pcof01100
Metabolic pathways
pcof01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
POR16_04860
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
POR16_04860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
POR16_04860
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_04860
Enzymes [BR:
pcof01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
POR16_04860
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Precursor biosynthesis
Amino acid ligase
POR16_04860
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
TTL
ATPgrasp_YheCD
GARS_A
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QGL55712
LinkDB
All DBs
Position
1091744..1092703
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AA seq
319 aa
AA seq
DB search
MTAAVLSSLRSTLEPKSFGRVAVLFGGKSAEREVSLNSGNAVLKALLDAGVDAFGIDVGD
DFLHRLVSEKIDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQVW
QSLGLPTPLHAVLENENDCICAATELGFPLIVKPAHEGSSIGMAKVNSVDELIAAWKAAS
TYDSQVLVEQWIQGPEFTVASLRGQVLPPIGLGTPHSFYDYDAKYLASDTQYRIPCGLGD
VQEQALKELAARACDAIGIAGWARTDVMQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAG
LDFQQLVLAILADSVQARG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgccgtcctgtcttccctgcgctcgacactggagccgaaaagcttcggccgt
gtcgccgtgctcttcggtggcaagagtgccgaacgggaagtctctctgaattcgggcaat
gcagtgcttaaggcgctgctcgatgcgggcgtcgatgcgttcggtatcgatgtgggggat
gatttcctgcaccgtctggtcagtgaaaagatcgaccgtgccttcatcgttctgcacgga
cgcggtggcgaagacggcaccatgcaagggctgctcgagtgtcttgaaatcccttacaca
ggcagtggcgtactggcttctgcgctggcgatggacaagctgcggaccaagcaggtctgg
cagagtctgggcctcccgacgccactgcatgcggtgctggaaaacgagaacgattgtatt
tgcgccgcgacggaactgggcttccctttgatcgtcaaaccggcccatgaaggttcaagt
atcggtatggcgaaggtgaacagcgtcgatgaattgatcgccgcctggaaagccgccagt
acctacgattcgcaagtgttagtcgagcagtggattcagggccctgagttcactgtggcc
tctctgcgtgggcaggtgctgcctcccatcggccttggtactcctcacagtttttacgat
tacgacgccaagtatctggcttcggatacgcaataccgtatcccgtgcgggcttggcgat
gttcaggaacaggcactcaaagaacttgctgcacgcgcctgcgatgccattggcattgcc
ggatgggcgcgcacggacgtcatgcaggacgcgcagggcaagttctggttgctggaagtt
aataccgtgcccggcatgaccgatcacagcctggtcccgatggcggcgcgtgctgccggt
ctggattttcaacaactggtgttggcgattctggccgacagcgttcaggcgagagggtaa
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