Pseudomonas coronafaciens pv. oryzae: POR16_05475
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Entry
POR16_05475 CDS
T08147
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
POR16_05475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcof03400
]
POR16_05475
Enzymes [BR:
pcof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
POR16_05475
DNA repair and recombination proteins [BR:
pcof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
POR16_05475
Prokaryotic type
POR16_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGL55823
LinkDB
All DBs
Position
1231599..1232291
Genome browser
AA seq
230 aa
AA seq
DB search
MTSDDRIKLEPSWKEALRDEFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPTPPSLVNIYKELKRDLNIDIPNHGCLQSWA
DQGVLMLNTTLTVERANAASHAGKGWQHFTDRIIQVVSEHQPHLVFLLWGAHAQSKQKLV
DATKHLVLTSVHPSPLSAYKGFLGNGHFGRANKYLEQNGLAPINWRLPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacgaccgcatcaagcttgagccaagctggaaagaagccttgcgtgacgaa
ttcgaacaaccctatatggctcaattgcgtgagtttctgcgtcaggagcatgcggccggc
aaggaaatctatccgcccggaccgctgattttcaatgcgctgaactcgacgccgctggat
aacgtgaaagtggtgatcctcggtcaggacccgtatcacggtcccaatcaggcacacggt
ctgtgcttttcggttcaaccgggcgtgccgacgccgccatcgctggtcaacatctataaa
gagctcaagcgcgacctgaatatcgatattccgaatcatggctgcctgcaatcgtgggct
gatcagggcgtgctgatgctcaacactaccctgacggtcgaacgcgcaaacgctgcttct
catgcggggaaaggctggcagcattttaccgaccgaatcattcaggtggtcagtgagcat
caaccgcatctggtctttctgttgtggggcgctcatgcgcaaagcaagcagaagctggtc
gatgcgaccaagcatctggtgttgacgtccgtccatccttcaccgctctctgcctataaa
ggctttttgggcaacgggcacttcgggcgtgccaataagtaccttgagcaaaacggcctg
gcgccgatcaactggcgactgcctgcgctttga
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