Pseudomonas coronafaciens pv. oryzae: POR16_13230
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Entry
POR16_13230 CDS
T08147
Name
(GenBank) PAS domain S-box protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE
HATPase_c
PAS_9
PAS
Response_reg
PAS_4
HisKA
PAS_8
PAS_3
Hpt
PAS_10
dCache_1
DUF2111
Motif
Other DBs
NCBI-ProteinID:
QGL57234
LinkDB
All DBs
Position
complement(2927623..2931675)
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AA seq
1350 aa
AA seq
DB search
MKKSSFTWLASWMALVLLVGLGVSYIASHEQARSIDAHVEQALKEAGEGIGDNLQARLRV
YEYRLRGLRGAIHMLDLAHVNSSQISRYSKGRDIEKEYPGARGFGFIRRVPASEEADFVR
RVRADGMPDFKISRLGTQQGDRFIVQFIDPLARNLQAPGLDIASEERRRNAAIQAMLTGT
ATLSAPVTLLQNNDDHMRSVLFMLPVYITPETPPDSTQRETSLIGWTYAPLAMREVMGNL
DPVNHRLHLRLYDVSEGKQQIYQTPENGPEPEILQTYAFEREIYGRVWRMEVGAHPQFVV
ALDPVPAGRVFIIGVLVSLMLTVLVGTLLVSRQRKQQFIAGQARLATIVENSSDAIIGEA
LDGRIITWNRAAEQMFGYDEGEVLGSPLAPLLVPPPLVHEDEQLLKRVARGELGSTLETQ
RLHKSGQLIDVTITCSFIREADGTILGAAKMMHDITDRKRVERYLIEFNAQLEQQVSERT
AELSRVAGLLQAVLDASSEVSIIVIDPQGQIVVFNRGAELLLGYGNSEMVRRKDPSVFHL
PEEVAARSAELSREYGTSIVGIDVFFYKADREGSETRQWTYVRRDGTTVPVSMIVTPIRT
ADGEVIGHLGIAQDITERLHRNAELHAAKASAEAANAAKSLFLANMSHEIRTPMNAVIGI
SHLLHNTALNDQQRQLLTKLQIAGRSLLGIINDILDIAKIEAGEMRLENNPFSPRLLFDE
LSELFSPQAQEKGLRFSVSVVTPLPGLLIGDALRVNQILMNLVGNALKFTTVGGVDVTVS
CESDTADTCWLRLSVQDTGCGIPADVLGQLFSPFTQADASTTRRFGGTGLGLSVVRGLSE
QMGGRVGVESELGAGSEFWVSLPFRISQSDVDPSGTGNSLEVMLLSDDAPSSAMLQRLCR
SLGWRVTSLADEQTLHNTLQERKQRNAAVPDVLLVDWQRPPVEEVKRLIDSTPLPIILVT
QSEAWAELGPLVDTVLLKPLDSSALFNAVNACIAKYQGSTERVIQATRLDTSMTLWLSGL
NLLLVDDSDINLEVGSLLLQQQGALVQTCTNGFLALERLRQTPDFFDAVLMDVQMPEMDG
YEATRRLRNELGLTRLPVLALTAGALAEERRQAELAGMDDFLTKPLDPAALIRAIRRAVE
RVRGAPLAVGAIVQDAPAHSEWPVIEGIDTQEVAGRLGNDVPLFLSSLRRFFNEFVEFGE
SEKVLMRARQNSAQTIADLHKLRGSAHLLGATETGRHAGLAETLLRDGHDPEQALRDLSA
AFRVLQECTSVLPDITPMPHSDADLETSREALSALRELLENRDIAALDQFSQAAPALREQ
AGQALVEQLWLAIEGLEFEQALQLLERADL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagctcttttacgtggctcgccagctggatggctctggttttgttggtcggg
ctaggcgtcagctacatcgccagtcatgagcaggccaggtcgattgatgcacatgtagag
caggcgctcaaagaggccggagaggggatcggcgataacttgcaggcgcgcctcagggtg
tatgaataccgccttcgcggcctgcgcggtgccattcatatgctggatctggcgcatgta
aacagtagccagataagccgctacagcaagggccgcgatatcgagaaagagtaccccggt
gcgcgcggttttggttttatccgtcgggtaccagccagcgaagaagccgatttcgtgagg
cgtgtcagggctgatggcatgccggactttaaaatcagtcgactgggtacccaacagggc
gaccggttcatcgttcagttcatcgaccctctggcccgcaatctccaggcaccggggctg
gatatcgcgtctgaggagcggcgccgcaatgcggcgattcaggccatgcttaccgggact
gcaaccctgtcggcacctgtcaccctgttgcagaacaacgatgatcacatgcgctcggtt
ctgttcatgttgccggtttacatcactccggaaaccccgcccgatagcacacagcgcgaa
acctctttaatcggctggacttacgcgccgctggccatgcgtgaggtgatgggcaatctg
gacccggtgaaccacaggctgcacctcaggctctacgacgtcagcgagggcaagcagcag
atctaccagacaccggaaaacggtcccgagccggaaatcctgcagacttatgctttcgag
cgagaaatctatgggcgtgtgtggcgcatggaagtaggtgcccacccacaatttgtcgtg
gctctcgatccggtcccggcgggcagggtcttcatcatcggcgtgttggtcagccttatg
ttgacggtgctggtcggcactctgttggtgtctcgccaacgcaagcagcagttcatcgcc
ggtcaggcaaggctggcgacgattgtcgaaaactccagcgatgcgatcatcggtgaggcg
ctggacgggcgcatcattacttggaaccgtgctgccgagcagatgttcggctatgacgag
ggcgaagtgctgggaagcccactggcaccgctgttggttccgccgccgctggttcatgaa
gacgaacaactgctgaaacgcgtggcgcgtggcgagctgggttcgacgctggaaacccag
cgcctgcacaagagcggtcaactgattgatgtgacgatcacctgcagcttcattcgcgaa
gcggacggcacaatactcggtgccgcgaaaatgatgcacgacatcactgaccgcaaacgc
gtcgagcgctacctcattgagttcaacgcgcaactcgagcaacaagtcagtgagcgtact
gccgagctttccagagtcgccggattgctacaggcggtgctggatgcttcctcggaggtt
tcgatcatcgttatcgatccgcaagggcagatcgttgtgttcaatcgaggggctgaactg
ctgctgggctacggcaactcggaaatggtcaggcgcaaggacccgagcgtatttcacctt
cctgaagaagtggccgcgcgctccgcagagctgagccgtgagtacggcacctcaatcgta
ggcattgacgtatttttctacaaagcggaccgtgaaggttcggaaacccgacaatggacc
tacgtgcgcagggacggcacgacggtgcccgtctcgatgatcgttacgcctatccgtact
gccgatggagaggttatagggcaccttggcattgctcaggacatcaccgagcgactgcac
cgcaacgccgagctgcacgcagccaaagccagcgccgaggccgccaatgcggccaagagc
ctgtttctggccaacatgagccatgaaatccgcacccccatgaatgccgtgatcggcatt
tcccatctgctgcataacactgccttgaacgatcagcagcgccagttgctgaccaagttg
cagattgccggcaggtcactgctggggatcatcaacgatattctggacatcgcaaaaatc
gaggcgggagagatgcggctggaaaataatcctttcagcccgcggctgctgttcgacgag
ttgagcgagctgttttcaccccaggcgcaggaaaaaggtctgcgtttttcggtcagtgta
gtcaccccgttacctggcttgcttataggtgatgcattgcgcgtcaatcagatcctcatg
aatctggtcgggaatgcgctgaagttcacaaccgtgggcggcgtcgatgtgacggtgagt
tgtgaaagcgatactgccgatacctgctggctgcgtttgtctgtgcaggatacgggctgc
ggcataccggccgatgtgcttggtcagttattttctccctttactcaagcggacgcctct
acaacgcgcaggtttggtggcaccgggctgggtctgtcggtggtacgcgggctctccgag
caaatgggaggtcgggtcggggtagagagcgagcttggtgcaggcagtgagttctgggtg
tcattgccgtttcggatcagccagagtgacgtcgatccgtcaggcaccggaaacagtctg
gaggtcatgctgctcagcgacgacgcgccgtcatccgcgatgctgcagcggctatgtcgc
agcctgggctggcgggttaccagcctcgccgatgagcagacactgcacaacaccttgcag
gagcgtaagcagaggaatgctgcagtgccggacgtgctgctggttgactggcaaaggccg
cctgttgaggaggttaaacgtctgattgactcgacgccactcccgatcattctggtcacc
cagtccgaggcgtgggcagagttgggtccgctggttgacacggtattgctcaagccgctg
gacagctcggcactgttcaatgcggtaaatgcttgcatcgccaagtaccaaggcagcacc
gaacgagtcattcaggccacgcgcctggatacgtccatgacactttggctcagcggcttg
aacctgctgctggtagacgacagcgacatcaatctggaggtcggcagcctgctcctgcaa
caacagggcgctttggtacaaacctgcaccaacgggtttctggccctcgaacggctacgt
cagacgccagacttcttcgacgctgtgctaatggatgtgcagatgccggaaatggatggc
tatgaagccacgcggcgcttgcgcaacgagctgggcctgacccgtctgcctgtgctggcg
ttgaccgcaggtgctctggcagaagagcggcgacaggcggagctggcgggtatggatgac
ttcctcaccaagcctctggaccccgcagccttgatccgggcaatacgccgtgctgtcgag
cgtgtaagaggcgctccgctggcggtcggcgcaatagtgcaggacgcaccggcacattcc
gaatggccggtgatcgagggtatcgacacccaggaagtcgccggtcggctcggcaatgac
gtgcccttgtttctgtcgtccctgaggcgttttttcaacgaattcgtcgagtttggcgaa
agcgaaaaggttctgatgcgtgcgcggcaaaactccgctcagacaattgccgatctgcat
aagctgcgcggctctgcgcacctgctaggcgcgaccgagacggggcgtcatgccggtctg
gcggaaaccttgctgcgcgatggccatgacccggaacaggcgctgcgagacctgagtgca
gcgttccgggtgttgcaggagtgtacttcggtacttccggacatcacgccaatgccgcac
agcgatgcggatctcgagacctctcgagaagcgctttcagcgctacgtgagttgctcgaa
aaccgtgatatcgccgcactggatcagttttcgcaagctgcgcctgctcttcgcgaacag
gccgggcaggccttggtcgagcagctttggctggccattgaagggctggagttcgagcag
gcgctgcaactgctcgaacgggcggacttatga
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