KEGG   Pseudomonas coronafaciens pv. oryzae: POR16_24500
Entry
POR16_24500       CDS       T08147                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcof  Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcof00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    POR16_24500 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcof02044]
    POR16_24500 (tssI)
Secretion system [BR:pcof02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   POR16_24500 (tssI)
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 Gp5_C DUF2345 DUF3540
Other DBs
NCBI-ProteinID: QGL59270
LinkDB
Position
5370863..5372722
AA seq 619 aa
MISDLIGQFTAQNNRLITFDSPLPPEQELVLESFSGEEGLSILFEYELQLLSSDAKIELK
KLIGKKVSMEITLADGGTKVISGHCSHFNHAGANGGIANYAATVVPWLWILSRRRDSRIF
QDKSVEDIIREVFAYYLSLADYEFRLSRSLKPISYCTQYQESDLNFVLRLLQQEGLFFNF
EHRKDGHKLVVFDDSLNFEPLPGQPSIRYHTASVTEESDSITEWSSQRALHSTRLSLKSF
DYKQPRFSNQVQLETLAKQGDIGEYEVFEYEGLYGYSDPQHGQQIARNRLEAMEVLGKTF
QGRSNCRAMQPGYYFELTQHYDHDNGSVEDRQFLLLSVKHSGRNNYSGSGEAFYQNQFIC
IRRKIPFKPPLTTPRALIGGPQTAIVVGPPGEEIYTDEMGRVKVQFHWDRYGKFDDKSSC
WVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLVMGSLYNSQNTPPWSLPANKTQ
SGFLTRSAKGDGGTANFFRFEDKAGAEQVIVHAERNMDTEVELDETHQVGNNRKVTVGGT
NTEIIQGDTLIKIEQGSLKITVDKQLVNISAMTEITLTVGSSSITLKPKSIEIKGDEIKI
LGTNTFVEGDRVDINIEKS
NT seq 1860 nt   +upstreamnt  +downstreamnt
gtgatttcggatctcattgggcaatttacagctcagaataatagactcatcacattcgac
tcccctctgcctcctgagcaggagcttgttcttgaaagcttcagtggcgaagaagggctt
tcaatcctgttcgagtatgagcttcaattgctatccagcgatgcgaaaatcgagcttaaa
aagttaattggcaaaaaagtctcgatggaaataactttggctgatggtggtacgaaggtg
atcagtggacactgctcgcatttcaaccatgctggcgccaatggcgggatcgctaattat
gcagcgaccgtagtaccttggttgtggatactcagtcgtcgacgagactcacgtatcttt
caagacaaatctgtcgaagatataatcagagaagtatttgcctattacctttctttagcc
gactatgagtttcgcctaagtcgatcattgaagccaattagctattgtacgcaataccaa
gagtcggaccttaattttgtactcagacttcttcaacaggaaggactcttcttcaatttt
gagcatcgtaaggatgggcacaaattagttgtctttgacgatagcctgaatttcgagcca
ctgccggggcagccgtcaatacgttatcatacagcatcggtaactgaagaatctgactct
atcactgaatggtcatcccagcgagcccttcactcgacacggctatcgttaaaatcattc
gactacaaacagcctaggttttccaaccaggtacagcttgagaccttagccaagcagggg
gatattggagagtacgaagtttttgaatatgagggactttacggttattcagatccacag
catgggcaacagattgctcgcaatcggcttgaagccatggaagttctgggcaaaaccttt
caaggtaggagtaactgtcgtgcgatgcagccgggctattatttcgaacttactcaacac
tatgatcacgacaatgggtctgttgaagaccggcagtttctattgttaagcgtaaaacat
tcaggccgaaacaactactccggctcaggagaagcgttttaccagaaccagtttatttgc
attcgccgcaaaattccgttcaagcctccgctgaccacaccacgagctttgataggcggc
ccccaaaccgcaatcgtcgtcggcccgccaggcgaagagatctacaccgacgagatgggc
cgcgtaaaagtacagttccactgggaccgctatggcaagtttgacgacaagagctcctgc
tgggtccgtgtcgctcagtccggcgccagcggcggctttggcagtattcagatcccacgc
gtcggcgacgaagtggtggttgtgtttcttgatggcaaccctgaccgcccgctcgtcatg
ggcagcctgtacaacagccagaacacaccgccgtggtcactgccggccaacaagacccag
agtggcttcctgacacgttcggccaagggcgatggcggcacagccaacttcttccgcttt
gaagacaaggccggtgccgaacaagtgatcgtgcatgccgaacgcaacatggacaccgag
gttgagctggatgaaacacatcaggtcggaaataaccgcaaggtgactgtcggcggtacc
aatacggaaatcatccaaggcgatacgttaatcaaaattgagcaaggctcgctgaagatt
accgtcgacaagcaattggttaatatctccgccatgactgaaatcacactgacggtaggg
tccagcagcatcacccttaagccaaaaagcattgagatcaaaggcgacgagataaaaatt
ctcggcacaaacacctttgttgaaggcgaccgtgtcgatatcaacatagagaagtcctga

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