Segatella copri: LK433_00880
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Entry
LK433_00880 CDS
T07933
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcoi
Segatella copri
Pathway
pcoi00470
D-Amino acid metabolism
pcoi00550
Peptidoglycan biosynthesis
pcoi01100
Metabolic pathways
pcoi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LK433_00880
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LK433_00880
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LK433_00880
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcoi01011
]
LK433_00880
Enzymes [BR:
pcoi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LK433_00880
Peptidoglycan biosynthesis and degradation proteins [BR:
pcoi01011
]
Precursor biosynthesis
Amino acid ligase
LK433_00880
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
UEA43176
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Position
complement(203264..204259)
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AA seq
331 aa
AA seq
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MENSKRTIAIVCGGDSSEHDVSLRSGQGLYSFFDKERYNIYLVDVKGTDWHVALDNGETI
EIDKNDFSFVMNGKHVYFDYAYITIHGQPGENGVMQGYFDLIHLPYSTSGVLVEAMTFDK
YVLNNYLRGFGINVADSILLRRGEAYDEEEIAKRIGMPCFVKPAADGSSFGVSKVKNADQ
LAPALRVAFMESNEVMIEGFLDGTEISQGIYKTAEKTVVLPATEVVTTNEFFDYDAKYNG
QVQEITPARLSPETAEEVAKTTSRIYDILHANGIIRIDYIISKDKDGKDKVNMLEINTTP
GMTVTSFIPQQVRAAGLDIKDVLSEIVENQF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcaagagaacgatagccatcgtatgtggtggtgattcttctgagcacgac
gtatcattgcgctcaggacagggtttgtactctttctttgataaagagcgctacaatatt
tatctcgtcgatgtgaagggcaccgactggcatgttgctttggataatggtgagactatc
gagattgacaagaacgatttttctttcgttatgaacggcaagcatgtctatttcgattat
gcttatatcaccatccacggacagcctggtgagaatggtgtgatgcagggctacttcgac
ctcatccatctgccatactctacaagcggtgttctggtagaggcaatgacttttgataag
tatgtgctcaataattatctgcgcggtttcggtataaacgtagcagacagtatcttgctc
cgtcgcggtgaagcttatgatgaagaagagattgccaagcgcatcggtatgccttgtttc
gtaaagcctgctgctgacggcagtagctttggtgtgagcaaggtgaagaatgctgaccag
ctggctccagccctccgtgtggctttcatggagagcaatgaggtaatgatcgagggcttc
cttgatggtacagagatttcacagggtatctacaagacagccgagaagactgttgtactg
ccagctacagaggtggttactaccaacgagttcttcgattacgatgccaagtataacggt
caggtacaggaaatcactccagcccgtctctctccagagactgcagaagaggttgccaag
actacatcccgcatctacgacattcttcatgccaacggtatcatccgtatcgactatatc
atctctaaggataaggatggtaaagacaaggtgaacatgctggagatcaataccactcca
ggtatgaccgttaccagtttcattcctcagcaggttcgtgcagcaggtcttgatatcaag
gatgtgctcagcgaaattgtggagaatcagttctaa
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