Puma concolor (puma): 112867501
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Entry
112867501 CDS
T08890
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112867501 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoo03041
]
112867501 (DDX23)
Enzymes [BR:
pcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112867501 (DDX23)
Spliceosome [BR:
pcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112867501 (DDX23)
Complex C
U5 SnRNP specific factors
112867501 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
112867501
NCBI-ProteinID:
XP_025786278
UniProt:
A0A6P6IH55
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSR
SRSRSKSTERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEDDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE
VEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREE
KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIQDVSMVVNYDMAKNIEVLPARAPSGELCTRVTMESGCATRAGGAQLWPVV
VCQRLDGT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgacaaaaaggaccgtgatgcatcaccttccaaggaggaaaga
aagcgatctcggactcctgacagagaacgggatagagaccgggaccggaagtcttcccca
tccaaagacaggaagcggcatcgttcaagggataggcgtcgaggaggtagccgttctcgc
tcccggtcccgttccaagtctacagaaagagagcgaaggcacaaagaacgagaacgggat
aaggagcgtgatcggaataagaaggaccgagaccgggataaggatgggcaccgacgggac
aaggaccggaaacgatccagtttatctcctggccgaggaaaagattttaaatctcggaaa
gacagagactctaagaaggatgaagacgatgaacatggtgataagaaacctaaggctcag
ccgttatccctggaggaacttctggccaagaagaaggctgaggaagaagctgaggctaag
cccaagttcctctccaaagcggaacgagaggctgaagccctaaagcgacgacagcaggag
gtggaggagcgacagaggatgctcgaagaagagcgcaagaaaaggaaacagttccaagac
ttgggcaggaaaatgttggaagaccctcaggaacgggaacgtcgggaacgcagggagagg
atggagcgggagaccaatggaaatgaggatgaggaagggcgacagaagatccgggaagag
aaggataagagcaaggaactgcatgccattaaggagcgctatctgggtggtatcaagaag
cggcgccgaacaaggcatctcaatgaccgcaagtttgtctttgagtgggacgcatcggag
gacacgtccatcgactacaaccccctatacaaggaacggcaccaggtgcagttgttgggg
cgaggcttcattgcaggcattgacctgaagcagcagaaacgagagcagtcacgtttctac
ggagacctgatggagaagaggcggacactggaagaaaaggagcaggaggaggccagactc
cgcaagctccgtaagaaggaagccaagcagcgctgggatgatcggcactggtcccagaag
aagttagatgagatgacggaccgggactggcggatcttccgagaggactacagcatcacc
accaaaggtggcaagatccccaatcccatccggtcctggaaagactcttctctgcccccg
cacatcttggaggtcatcgataagtgcgggtacaaggaaccaacacctatccagcgtcaa
gcaattcccattgggctacagaatcgtgacatcattggtgtggctgagaccggcagtggc
aagacagcagccttcctcatcccattgctcgtctggatcaccactctccccaaaattgac
aggatcgaagagtcagaccaaggcccttatgccatcatcctggcccccactcgtgagttg
gctcagcagattgaggaagagaccatcaagtttgggaagccactgggcatccgcactgtg
gctgtcattggcggcatctccagagaggaccagggcttcaggctgcgcatgggctgtgag
attgtgatagctaccccaggacgtctgattgatgtgctggagaaccgttaccttgtgctg
agccgctgtacctatgtggttctggatgaggcagataggatgattgacatgggctttgag
ccagatgtccagaagatcctggagcacatgcctgtcagcaaccagaagccggacacggat
gaagctgaggaccctgagaagatgttggccaactttgagtcaggaaaacataagtaccgc
caaacagtcatgtttacggccaccatgcccccagcggtggagcgtctggcccggagctat
ctgcggcgacctgctgtggtgtacattggctctgcaggcaagcctcatgaacgtgtggaa
cagaaggtcttcctcatgtcagagtcggaaaagaggaaaaagctgctggcaatcttggaa
caaggctttgatccacccattatcatttttgtcaaccagaagaagggctgcgatgttttg
gccaaatctctggagaagatggggtacaatgcttgcacgctgcatggtggaaaaggccag
gagcagcgagagtttgcactgtccaacctcaaggctggggccaaggatattttggtggct
acagatgtggcgggtcgtggtatcgacatccaagatgtgtctatggttgtcaactatgat
atggccaaaaacattgaagtcctgcctgcccgcgcgccctctggggagctttgcacaagg
gtgacaatggagagcggttgtgccacacgggcaggtggggcccagttgtggcctgttgtg
gtgtgccagcggctggatggcacctag
DBGET
integrated database retrieval system
