Propithecus coquereli (Coquerel's sifaka): 105817355
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Entry
105817355 CDS
T08746
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03030
DNA replication
pcoq03420
Nucleotide excision repair
pcoq03430
Mismatch repair
pcoq03440
Homologous recombination
pcoq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105817355 (RPA1)
03420 Nucleotide excision repair
105817355 (RPA1)
03430 Mismatch repair
105817355 (RPA1)
03440 Homologous recombination
105817355 (RPA1)
03460 Fanconi anemia pathway
105817355 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoq03000
]
105817355 (RPA1)
03032 DNA replication proteins [BR:
pcoq03032
]
105817355 (RPA1)
03400 DNA repair and recombination proteins [BR:
pcoq03400
]
105817355 (RPA1)
Transcription factors [BR:
pcoq03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105817355 (RPA1)
DNA replication proteins [BR:
pcoq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105817355 (RPA1)
DNA repair and recombination proteins [BR:
pcoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105817355 (RPA1)
MMR (mismatch excision repair)
105817355 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
105817355 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
105817355
NCBI-ProteinID:
XP_012508473
Ensembl:
ENSPCOG00000001799
UniProt:
A0A2K6EFR3
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVSQLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEQEQLSSNCICQINRFIVNTLKDGRRVVILMELKVLKSAEEVGLKIGNPVPYNE
GHGQQQVVPSPVSAASPATSKTQPQNGSLGMGSTVSKAYGASKTFGKTGGASLSSTSGGT
QAKVVPIASLTPYQSKWTICARITNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETTVMPCEDGHHLPTVQF
DFTGIGDLESKPKDSLIDIIGICKSYDDATKITVKSNNREVAKRNIYLMDTSGKVVTATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGVGGSNTNWKTLYEVKAENLGQGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNTAYLGELKDKNEQAFEEVFQNANFRSFMFRIRVKLENYNDESRIKATVMDVKPVDYR
EYGRRLITNIRRNSVM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcagccaactgagcgagggggccattgcggccataatgcaacaaggagatacatcc
ataaaacccatcctccaagtcattaacattcgtcccattaccacagggaatagtccaccc
cgctatcgactacttatgagtgatggattgaacactttatcctctttcatgttggcaaca
cagttgaaccctcttgttgagcaagaacaattgtccagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggaattaaaa
gttttgaaatcagctgaagaagttggattaaagattggcaatccagtgccctataatgaa
ggacatgggcagcagcaagtagttccgtctccagtctcagcagccagtccagcaaccagc
aagacccagccacagaacgggagcttgggaatgggttccactgtttctaaggcttatggt
gcctcaaagacatttggaaaaactggaggtgccagcctttcgagcacttctgggggcaca
caggccaaggtggtgcccattgccagcctcaccccataccagtccaagtggactatttgt
gctcgtataaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctctatagaactagtggatgaaagtggtgaaatcagagctacagctttcaatgag
caagtggacaagttctttccccttattgaagtgaacaaggtgtattatttctcgaaaggt
accctgaagattgctaacaaacaattcacggctgttaaaaatgactatgagatgaccttc
aataatgagaccactgtcatgccctgtgaagatggtcatcatttacctacagttcagttt
gatttcacagggattggtgacctagagagcaagcccaaagactcacttatagacataatc
gggatctgcaagagctatgacgatgccactaaaatcacagtgaagtctaacaacagagag
gttgctaagagaaatatctatctgatggacacttcagggaaagtggtgactgctactctg
tggggggaggatgctgatagatttgatggctctagacagcctgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcactatcatt
gtgaatcctgacatcccagaggcctataaacttcgtggatggttcgactcagaaggacaa
gccttagatggtgtttccatctctgatctcaagagtggaggagtgggagggagcaacacc
aactggaaaactttatatgaggttaaagcagagaacctgggccaaggtgacaaggcagac
tattttagctcggtggcaacagtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccgactcaggactgcaataagaaagtgattgatcaacagaatggattataccgttgt
gagaagtgtgacagtgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagccatcctc
ggacaaaacactgcttatctgggggaattgaaagacaagaatgaacaggcatttgaggaa
gtttttcagaatgccaattttcgatctttcatgttcaggatcagggtcaaactagagaac
tacaatgatgagtctcgaattaaggccacggtgatggacgtgaaacctgtggactacaga
gaatatggcagaaggctgatcacaaacatcaggagaaactcagtaatgtga
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integrated database retrieval system
