Pseudomonas chlororaphis subsp. aurantiaca: JM49_05395
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Entry
JM49_05395 CDS
T03338
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00470
D-Amino acid metabolism
pcp00550
Peptidoglycan biosynthesis
pcp01100
Metabolic pathways
pcp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JM49_05395
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JM49_05395
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JM49_05395
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcp01011
]
JM49_05395
Enzymes [BR:
pcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JM49_05395
Peptidoglycan biosynthesis and degradation proteins [BR:
pcp01011
]
Precursor biosynthesis
Amino acid ligase
JM49_05395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
AIS11130
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All DBs
Position
1166539..1167633
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AA seq
364 aa
AA seq
DB search
MSKLRVGIIFGGRSAEHEVSLQSARNIVDALDRERFEPVLIGIDKNGHWHLNDTSNFLIN
QENPALIALNQSNRELAVVPGKASQQLLETSNQELLGHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGLAVTPFITLNRATAARTDFAQAQSKLGL
PMFVKPANQGSSVGVSKVTSEAQYHAAIELALGFDEKVLVESAVSGLEIECAVLGNDQPI
ASGCGEIVVGSGFYSYDSKYIDDQAAQVVVPADLSEEVSERIRALAVEAFQVLGCSGLAR
VDVFLTQGGEVLINEINSLPGFTRISMYPKLWQAAGMTYSELVSRLIELALERHAARQAL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctgcgggtcgggattatttttggtggccgttcggccgaacacgaagtgtcg
ctgcaatcggcgcgcaacatcgtcgatgcgctggatcgcgagcgcttcgaaccggtgctg
atcggcatcgacaagaacggccattggcacctcaacgacacctcgaacttcctgatcaac
caggaaaacccggcgctgatcgccctcaaccagtccaaccgtgaactggcggtggtgccg
ggcaaggccagccagcaactgctggaaacttccaaccaggaactgctgggccacgtcgat
gtgattttccccatcgtccacggcaccctcggcgaagacggttgcctgcaaggcctgctg
cgtatggccgacctgccgttcgtgggctctgacgtgctgggttcggcggtgtgcatggac
aaggacatcagcaagcgcctgctgcgcgatgctggcctggcggtgacgccctttatcacc
ctgaaccgagccaccgcggcgcgcaccgactttgcccaggcgcaaagcaagctgggcctg
ccgatgttcgtcaaaccggcgaaccagggctcgtccgtgggcgtgagcaaggtcaccagc
gaggcgcaataccacgcggctatcgagctggcgctgggcttcgatgaaaaggtcctggtg
gagtcggcggtcagtgggctcgagatcgagtgcgcggtgctgggcaacgaccagccgatt
gccagtgggtgcggggaaatcgtcgtcggtagcggtttttattcctacgacagcaaatac
atcgacgaccaggcggcccaggtggtggtgccggcggacctcagcgaagaggtcagcgag
cgcattcgcgccctggccgtcgaggcattccaggtgctgggctgttcggggctggcgcgg
gtcgatgtattcctgacccagggcggcgaagtgctgatcaacgagatcaattcgctgccc
ggcttcacccgcatcagcatgtatccaaagctgtggcaggccgcgggcatgacctacagc
gaactggtcagccgcctgatcgagctggcgctggagcgccatgcggcgcgccaggcgttg
aaaatcagccgctga
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