Pseudomonas chlororaphis subsp. aurantiaca: JM49_08920
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Entry
JM49_08920 CDS
T03338
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_08920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_08920
Transporters [BR:
pcp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JM49_08920
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
nSTAND1
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_25
AAA_29
AAA_22
nSTAND3
AAA
AAA_5
Mg_chelatase
NACHT
AAA_23
Rad17
ATPase_2
sCache_3_2
NB-ARC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AIS11799
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Position
complement(1894588..1895577)
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AA seq
329 aa
AA seq
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MSFVSVQHLQKNYSGTPVFSDINCEIHKGEFVTLLGPSGCGKSTLLRCIAGLTPVDAGKI
LLDGHDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADESHKRVLEVLRL
VELHDFASRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQ
RELGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLL
DAESASKLLQRPINGRIAIRPEAIELHKDGEPDAQIRSHSLLGNVIRYRVEARGVELVVD
VLNRSPDDLHPDGQRLALSIDPAALCEVA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtcagcgtccaacacctgcagaaaaattacagtggcaccccggtgttcagc
gacatcaactgcgaaatccacaagggcgaattcgtcaccctgctcggcccctccggctgc
ggcaagtccaccctgttgcgctgcatcgccggcctgactccggtggacgccggcaagatc
ctcctcgacggccacgacatcgtgcccctgagcccacagaaacgcgggatcggcatggtg
ttccagagctatgcgctgttccccaacatgaccgtggaacagaacgtggccttcggcctg
cgcatgcagaaggtcaacgccgacgagagccacaagcgcgttctcgaagtcctgcgcctg
gtggagctgcacgacttcgccagccgttatccccatcaactgtccggaggccagtgccag
cgcgtggcgctggcccgctcgctggtgacccgtccgcgcctgttgctgctggacgagccg
ctgtcggcgctggacgcacggatccgcaagcacctgcgcgagcagatccggcagatccag
cgcgaactgggactgaccacgattttcgtcactcacgaccaggaagaagccctgaccatg
tccgaccgcatcttcctgatgaaccagggcaagatcgtccagagcggtgacgccgagacg
ctctacaccgcaccggtggatgtgttcgccgcaggcttcatcggcaactacaacctgctg
gacgccgaaagcgccagcaagctgctgcagcggccgatcaacgggcgtatcgcaattcgc
cccgaggccatcgaactgcacaaggacggcgaacccgacgcgcagatccgcagccacagc
ctgctgggcaacgtgatccgctaccgggtcgaggcccgtggcgtggaactggtggtggat
gtgctgaaccgctcgccggacgatctgcaccccgacggtcaacgcctggccctttccatc
gatcccgcggccctctgtgaggtagcttga
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