Pseudomonas chlororaphis subsp. aurantiaca: JM49_16380
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Entry
JM49_16380 CDS
T03338
Name
(GenBank) alpha-amylase
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00500
Starch and sucrose metabolism
pcp01100
Metabolic pathways
pcp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JM49_16380
Enzymes [BR:
pcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
JM49_16380
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
JM49_16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
Mak_N_cap
TCAD9
FBF1
Soc
R3H-assoc
Motif
Other DBs
NCBI-ProteinID:
AIS13172
LinkDB
All DBs
Position
complement(3602110..3605424)
Genome browser
AA seq
1104 aa
AA seq
DB search
MAKKTRSATFIKDPLWYKDAVIYQVHVKSYFDSNNDGIGDFPGLIAKLDYIADLGVNTIW
LLPFYPSPRRDDGYDIAEYRGVSPDYGTLADARRFIAEAHKRGLRVITELVINHTSDQHP
WFQRARKAKAGSKARDFYVWSDDDQKYDGTRIIFLDTEKSNWTWDPVAGQYFWHRFYSHQ
PDLNFDNPQVMKAVLSVMRYWLDMGIDGLRLDAIPYLIERDGTNNENLPETHDVLKQIRA
EIDANYPDRMLLAEANQWPEDTQLYFGDVKGDDGDECHMAFHFPLMPRMYMALAQEDRFP
ITDILRQTPEIPANCQWAIFLRNHDELTLEMVTDRERDYLWNYYAADRRARINLGIRRRL
APLMERDRRRVELLNSLLLSMPGTPTLYYGDEIGMGDNIYLGDRDGVRTPMQWSIDRNGG
FSRADPASLVLPPIMDPLYGYQSVNVETQAGDPHSLLNWTRRMLAIRKQSKAFGRGSLKM
LSPSNRRILAYTREYTGPDGKHEIILCVANVSRSAQAAELDLSAFAGMVPVEMLGGNAFP
PIGQLNFLLTLAPYGFYWFVLAAENQMPSWHVEPAQSMPDFTTLVLKKRLEELLEAPSRT
TLEQSSLPTWLPKRRWFAGKDSAIEQVRIAYGVRFGDPQHPVLLSELEVSGGGQSGRYQL
PFGLLGEEQIGAALPQQLALARVRRGRQVGLITDAFALESFVHNVLQAIQTHTVLPCGEG
EIRFEATQQLAALGLGADSEVRYLSAEQSNSSVVIGGSLVLKLIRKVASGVHPELEMGAY
LTTAGFQHISPLLGSVVRRDGQGDSLLMIAQGYLSNQGDAWEWTQNNLERAIRDELADAM
SEQDQHYNALGELRDFAGMLGQRLGEMHQILAAPTANPDFRAQPSTDKDAQAWAKQIGAQ
LERALHLLKQHHAELTAEDQQRVASWTQHKKAILAHIQGLAKQAVGGLRMRVHGDLHLGQ
VLVIKGDAYLIDFEGEPARPLDERRGKHSPYKDVSGVLRSFDYAAALALSGQSLDASAHT
LAARQRVAERYLHEARESFVQAYRLAAASLAHAWREKNGEDAALALFSLEKAAYEVVYEA
ENRPAWLAVPLRGLHALLSDMKVE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaccaggtcagccactttcatcaaggacccgctctggtacaaggacgcg
gtgatctatcaggttcacgtcaaatcctatttcgactccaacaacgacgggatcggcgac
tttcccgggttgatcgccaagctcgactacattgccgacctgggtgtgaacaccatctgg
ctgctgccgttctacccctcgccgcgccgcgacgatggctacgacatcgccgaataccgt
ggcgtcagtcccgactacgggaccctggccgatgcccggcggtttatcgccgaggcccac
aagcgcgggctgcgggtgatcaccgagctggtcatcaaccacacctcggaccagcacccc
tggttccagcgggcgcgcaaggccaaggccggctccaaggcgcgggatttctatgtgtgg
tccgatgacgatcagaagtacgacggcacgcggatcatctttctcgacaccgagaaatcc
aactggacctgggacccggtggccggccagtacttctggcaccgcttctattcccaccag
ccggacctcaacttcgacaacccgcaggtgatgaaggcggtgctgtcggtgatgcgctac
tggctggacatgggcatcgacggcctgcgcctggacgccattccctacctgatcgagcgc
gacggcaccaacaacgagaacctgcccgagacccacgacgtgctcaagcagatccgagcc
gagatcgacgccaactacccggaccgcatgctgctggccgaggccaaccagtggccggaa
gacacccaattgtattttggtgatgtgaagggcgacgacggcgacgaatgccacatggcc
ttccacttcccgctgatgccgcgcatgtacatggcgctggcccaggaagaccgcttcccg
atcaccgacatcctgcgccagaccccggagattcccgccaactgccagtgggcgattttc
ctgcgcaaccacgatgagctgaccctggagatggtcaccgaccgtgagcgcgactacctg
tggaactactacgccgccgaccgccgcgcgcggatcaacctggggatccgccggcgcctg
gcaccgctgatggagcgcgaccgccgtcgcgtggaactgctcaacagcctgctgctgtcg
atgcccggcacgccgaccctgtattacggcgacgagatcggcatgggcgacaacatctac
ctgggcgaccgcgatggcgtgcgcacgccgatgcaatggtcgatcgaccgcaacggcggc
ttctcccgggccgacccggcgagcctggtgttgccgccgatcatggacccgctgtacggc
taccagtcggtgaatgtcgagacccaggccggcgacccgcattcgctgctcaactggacc
cggcgcatgctggcgatccgcaagcagtccaaggccttcggccgcggcagcctgaagatg
ctgtcgccgagcaaccgccggatcctggcctacacccgcgaatacaccgggcccgacggc
aagcacgaaatcatcctctgcgtggccaacgtctcgcgcagtgcccaggccgcggagctg
gacctgtcggcgttcgccggcatggtgccggtggagatgctcggcgggaacgcctttccg
ccgatcggccagctgaatttcctcctgaccctggcgccctacggtttctactggttcgtc
ctggcggcggaaaaccagatgccgagctggcatgtggaaccggcccagagcatgccggac
ttcaccaccctggtgctgaaaaaacgcctcgaggaattgctcgaagcgccgtcgcgcacc
accctggagcaaagctcgctgccgacctggctgcccaagcgccgctggttcgccggcaag
gacagcgctatcgaacaggtgcgcatcgcctacggcgtgcgcttcggcgatccgcagcat
ccggtgttgctcagcgagctggaagtcagtggcggcggccagagcgggcgctaccaactg
ccgttcggcctgctcggcgaagagcagatcggcgccgcgctaccgcagcaactggccctg
gcccgggttcgccggggccgccaggtggggctgattaccgatgccttcgccctggaaagt
tttgtccacaatgtcctgcaggcgatccagacgcacaccgtgctgccctgtggcgagggc
gagatccgtttcgaggccacgcagcagctggccgcgctcggcctgggcgcggactccgag
gtgcgctacctgtccgccgagcagtccaacagctcggtggtgatcggcggcagcctggtg
ctcaagctgatccgcaaggtggccagcggcgtgcacccggaactggagatgggcgcctac
ctgaccaccgccggcttccagcacatttcacccttgctcggttcggtggttcgccgggac
gggcagggcgacagcctgctgatgattgcccagggctacctgagtaatcagggcgacgcc
tgggagtggacccagaacaacctggagcgggcgatccgcgacgaactggccgacgccatg
tccgagcaggaccagcattacaacgccctgggcgagctgcgcgacttcgccggcatgctc
ggccagcgcctgggggaaatgcaccagatcctcgcagcgccgaccgccaacccagacttt
cgcgcgcagccgagcacggacaaggatgcccaggcctgggcgaaacagatcggcgcgcag
ctggaacgcgccttgcacttgctcaagcagcatcacgccgagctgacggccgaggatcaa
cagcgcgtggcgtcatggacccaacacaagaaggcgatcctggcgcatatccagggcctg
gcgaaacaggcggtcggcggcctgcgcatgcgcgtccacggcgatctgcacctgggccag
gtgctggtgatcaagggcgatgcctacctgatcgatttcgagggcgaaccggcgcggccg
ctggacgagcgccggggcaagcacagcccgtacaaggacgtcagtggcgtgctgcgctct
ttcgactatgccgcggcgctggcgctcagcggccagagcctcgacgcttcggcccacacc
ctggcggcccggcagcgggtcgccgagcgttatctgcacgaagcccgcgagtcgtttgtc
caggcgtaccggctggcggcagctagtcttgctcatgcctggcgggaaaaaaatggggag
gacgccgcgctggccttgttcagcctggaaaaagcagcctacgaagtggtgtatgaagcg
gaaaaccgtcctgcctggctcgcggtaccgctgcgcgggctgcatgcgttgctaagtgat
atgaaggttgagtga
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integrated database retrieval system
