Pseudomonas chlororaphis subsp. aurantiaca: JM49_21840
Help
Entry
JM49_21840 CDS
T03338
Name
(GenBank) GntR family transcriptional regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AIS14195
UniProt:
A0A1E1FTR4
LinkDB
All DBs
Position
4779885..4781300
Genome browser
AA seq
471 aa
AA seq
DB search
MTRYLNLAEYISSRIEQGLYGPGERLPSVRALSLEHGVSLTTVQQAYRVLESSGLAIPKP
KSGYFVPAGRRLPELPKMGRPSLRPVDISQWDLVQDLMRQEQNANAIQLGCGMPDTTAPT
LKPLLTALARISRRSDSPSLQYNHLQGVLSLREQIARLGVDSGCRLTPAEIVVTSGCQEA
LSIAIRALCEPGDIVAIASPCFHGIIQLLKAAGLKALEIPTDPVTGISLEAMEMALEQWP
IKAIQLTPNCNNPLGYIMPDDRKRAMIRLAQRYDVPIIEDDIYGDLAFRYPRPRTLKSFD
DDGRVLLCSSFSKTLAPGLRIGWIAPGRYLPQVLHMKYVGSGTTATQPQLAVAEFIAKGH
YLPHLRRMRKQYQRHRDLMTEWVSRYLPEGTRVSKPQGGFTLWVELPDEFDTYTLNRLLE
AEDIQIANGNIFSAAGKYRNCLRLNFAGVPNRKIEQAINKIGLAVAQLLPA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatacctgaatctcgccgaatacatcagcagccgcattgagcaggggttatac
gggccgggggagcgtttgccttcggtgcgggccctgagcctcgagcacggcgtcagcctc
accaccgtgcaacaggcctatcgggtcctggaaagctcgggactggctattcccaagccc
aagtcgggctatttcgtcccggccggccgacgtttgccggaactgccgaagatgggacgg
ccgtcgttgcggcctgtggatatttcccagtgggacctggtgcaggacctgatgcgtcag
gagcagaacgccaatgccattcaactgggttgcggcatgcccgacaccacggcgccgacc
ctcaagccgctgctgaccgccctggcgcggatcagtcggcgcagtgacagcccgagcctg
caatacaaccacctgcaaggtgtgctgagcctgcgcgagcagattgcccgcctcggcgtc
gactccggttgccgcctgacgcctgcggaaatcgtcgtcaccagcggctgccaggaagcc
ctgtccatcgccatccgcgcgctgtgcgaacccggcgacatcgtggccatcgcttccccc
tgctttcacggcatcatccaactgctcaaggccgccggcctcaaggccctggagattccc
accgacccggtcaccggcatcagcctggaagccatggaaatggccctggaacagtggccg
atcaaggccatccagctcacgcccaattgcaacaacccgctgggctacatcatgccggac
gatcgcaagcgcgcgatgatccgcctggcccagcgctacgacgtgccgatcatcgaagac
gatatctatggcgacctggcgttccgctacccgcggccgcgcaccctgaaatcattcgac
gacgacgggcgcgtgctgctgtgcagttcgttctcgaaaaccctggcgccaggcctgagg
atcggctggatcgccccggggcgttacctgccgcaagtgctgcacatgaaatacgtcggc
tccggcaccaccgcgacccagccgcaactggcggtggccgaattcattgccaagggtcat
tacctgccgcacctgcgacggatgcgcaaacagtaccagcgccatcgcgacctgatgacc
gagtgggtcagccgctacctgccggaaggcacccgggtcagcaaaccccagggcgggttc
accttgtgggtcgagttgccggacgagttcgacacctacaccctgaaccggctgctggaa
gccgaggacatccagatcgccaacggcaatatcttttccgcggccggcaagtaccgcaat
tgcctcaggctgaactttgccggcgtgcccaaccgcaagatcgaacaggcgatcaacaag
atcggcctggcggtcgcacaattgctccctgcctga
DBGET
integrated database retrieval system
