Pseudomonas chlororaphis subsp. aurantiaca: JM49_24535
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Entry
JM49_24535 CDS
T03338
Name
(GenBank) RND transporter
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Module
pcp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_24535
01504 Antimicrobial resistance genes [BR:
pcp01504
]
JM49_24535
Transporters [BR:
pcp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JM49_24535
Antimicrobial resistance genes [BR:
pcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JM49_24535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AIS14714
LinkDB
All DBs
Position
complement(5361500..5362600)
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AA seq
366 aa
AA seq
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MFRYALPLALPVSLAVLLSACGHEEAAQTTVRPAMVVQPEPAAQAMDSYPGEVRARYEPD
LAFRIGGKVSRRLVDEGQRVKADQPLAELDPQDVRLQLEATRAQVAAAEANLNLVRSERD
RYKTLMDRQLVSRSQYDNAENLYRSGLARLKQIKAEFDVASNQAGYAVLRAPQDGVVARR
TVEVGQVVAAGQTVFTLATDGEREVLISLPEQGFGRFHIGQPVSVELWSQPDQRFAGQIR
ELSPAADPRSRTFAARIAFTAGKVPAELGQSARVFIQAAANVPLSVPLSAVTAENGAAYV
WRVDANNTLKKTPVRLGAFGEKSVPVLEGLGVSDWVVAAGVHVLHEGQQVRPVDRSNRVV
NLAAKE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctatgccttacccctcgcgttgcccgtcagcctggccgttctgctgtccgcg
tgcggacatgaagaagcggcgcaaaccaccgttcgcccagccatggtggtgcagccagag
cccgcggcacaggcgatggacagctaccccggcgaggtccgcgcgcgttacgaaccggac
ctggcgttccggattgggggcaaggtcagccgacgactggtcgatgaggggcagcgggtg
aaagccgaccagccattggccgagctcgatccgcaggacgtgcggctgcaactggaagcc
acccgggcccaggtggcagcggccgaagccaacctgaacctggtgcgctccgagcgcgac
cgctacaagaccctgatggatcggcaactggtcagccgttcccagtacgacaatgccgag
aacctgtatcgctccggcctggcccggctcaagcagatcaaggccgagttcgacgtggcc
agcaaccaggccggctacgccgtgctgcgcgcgccccaggatggcgtcgtggcccggcgt
acggtcgaggtcggccaggtggttgctgccggccagaccgtctttaccctggccaccgac
ggcgagcgggaagtgctgatcagcctgccggagcagggttttggccgcttccacatcggc
cagccggtgtcggtggaactgtggagccagcccgaccagcgtttcgccgggcagattcgc
gagctgtcgccggccgccgacccacgctcccgcaccttcgccgcccgtatcgcctttacc
gccggcaaggtcccggccgaactggggcagagcgcccgggtgttcatccaggccgcggcc
aatgtgccgttgtcggtgccgctgtcggcggtgaccgcggaaaacggtgctgcttatgtc
tggcgggtagacgccaacaacaccctgaaaaagaccccggtgcgtctcggtgctttcggc
gagaagagcgtgccggtgctcgaaggcctcggggtcagtgactgggtagtggcggctggc
gtgcatgtgctccatgaggggcagcaggtacgcccggtggatcgctccaaccgcgtggtc
aatctggcggccaaggagtaa
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