Pseudomonas citronellolis: PcP3B5_12230
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Entry
PcP3B5_12230 CDS
T04637
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq00470
D-Amino acid metabolism
pcq00550
Peptidoglycan biosynthesis
pcq01100
Metabolic pathways
pcq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PcP3B5_12230 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PcP3B5_12230 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PcP3B5_12230 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcq01011
]
PcP3B5_12230 (ddl)
Enzymes [BR:
pcq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PcP3B5_12230 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcq01011
]
Precursor biosynthesis
Amino acid ligase
PcP3B5_12230 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_YheCD
GARS_A
ATP-grasp_5
TTL
Motif
Other DBs
NCBI-ProteinID:
AMO74701
LinkDB
All DBs
Position
1313493..1314440
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AA seq
315 aa
AA seq
DB search
MNDALKSTLEPRAFGRVAVLYGGRSAEREVSLKSGGMVLKALQDAGVDAFGIDVGDDLLQ
RLLSEKIDRAFIILHGRGGEDGSMQGLLEVAGIPYTGSGVLASALAMDKLRTKRVWLSLG
LPTPAYAVLASGDDCRRAATELGFPLIVKPAHEGSSIGMAKVDGVDALIAAWRSAAEYDS
QVLVEQWISGPEFTVATLRGQVLPAIGLGTPHSFYDYDAKYLASDTQYRIPCGLSPEKER
ELQDLCARACEALGIQGWGRTDVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQ
QLVLAILADSVEARG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcactcaaatccaccctcgagccccgcgccttcggccgcgtcgccgtgctc
tacggcggcaggagcgccgagcgcgaggtctcgctgaagtccggcggcatggtcctcaag
gccctgcaggatgccggggtggacgccttcggcatcgacgtgggcgacgacctgctgcag
cgcctgctgagcgagaagatcgaccgcgccttcatcatcctccacggccgtggcggcgag
gacggcagcatgcagggcctgctggaagtcgccggcattccctacaccggcagcggcgtg
ctggcttcggccctggccatggacaagctgcgcaccaagcgggtgtggctgagcctgggc
ctgccgacgccggcctatgccgtgctggccagcggggacgactgccgccgcgccgcgacg
gaactgggcttcccgttgatcgtcaagccggcccatgaaggctccagcatcggcatggcc
aaggtcgacggcgtggacgcgctgatcgccgcctggcgcagcgccgccgaatacgactcg
caagtgctggtcgagcagtggatcagcggccccgagttcaccgtggccaccctgcgcggc
caggtgctgccggccatcggcctgggcactccgcacagcttctacgactacgacgccaag
tacctggccagcgacacccagtaccgcatcccctgcggcctgagccccgagaaggagcgc
gagctgcaggacctgtgcgcccgcgcctgcgaggccctgggcatccagggctgggggcgg
accgacgtgatgcaggacgccgaggggcgtttctggctgctcgaagtcaacaccgcaccg
ggcatgaccgaccacagcctggtgcccatggccgcgcgcgcggccggcctggatttccag
caactggtgctggcgatcctcgccgacagcgtcgaggcaagggggtaa
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