Pseudomonas citronellolis: PcP3B5_16680
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Entry
PcP3B5_16680 CDS
T04637
Symbol
rpiR
Name
(GenBank) HTH-type transcriptional regulator RpiR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcq03000
]
PcP3B5_16680 (rpiR)
Transcription factors [BR:
pcq03000
]
Prokaryotic type
Helix-turn-helix
Other families
PcP3B5_16680 (rpiR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
DUF6644
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AMO75134
LinkDB
All DBs
Position
complement(1797906..1798763)
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AA seq
285 aa
AA seq
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MKNLLEQIQTRLEDLNKAERKVAEVILQNPQQATRFSIAALAQAASVSEPTVNRFCRSFG
MSGYPELKIQLAQSLASGAAFVTQAVAEDDGPEAYTRKIFGSTIASLDAAYKLIDPRAVD
RAVDLLIQARQIHFFGLGASSSVALDAQHKFFRFNLAVSAQSDVLMQRMIASVAHTGDLF
VVISYTGRTRELVEVARLARDNGASVLGLTAADSPLAKVCTLTLDIPLPEDTDIYMPMTS
RIIQLTVLDVLATGVTLRRGVDFQPHLRRIKESLVPTRYQLDEED
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgctggagcagatccagacgcgcctggaagacttgaacaaggccgaacgc
aaggtcgccgaggtgatactgcagaacccgcagcaggccacccgcttcagcatcgccgcg
ctggcccaggccgcgagcgtcagcgaaccgacggtgaaccgcttctgccgctccttcggc
atgagcggctacccggagctgaagatccagctggcgcagagcctggccagcggcgcggcc
ttcgtcacccaggcggtggccgaggacgacggccccgaggcgtacacgcggaagatcttc
ggcagcaccatcgcctcgctggacgccgcctacaagctgatcgacccgcgcgccgtggac
cgcgccgtggacctgctgatccaggcccggcagatccacttcttcggcctcggcgcctcc
agctcggtggcgctggatgcgcagcacaagttcttccgcttcaacctggcggtgtcggcg
cagagcgacgtgctgatgcagcggatgatcgcctcggtggcgcacaccggcgacctgttc
gtggtgatttcctataccggccgcacccgcgaactggtggaggtggcgcgcctggcgcgg
gacaacggcgcttcggtgctcggcctgaccgccgccgactcgccgctggccaaggtctgc
accctgaccctggacatcccgctgccggaagacaccgacatctatatgccgatgacctcg
cggatcatccagctgacggtgctcgacgtgctggccaccggcgtgaccctgcgccgcggc
gtggacttccagccgcacctgcgcaggatcaaggagagcctggtgccgacgcgctaccag
ctggacgaggaagactga
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