KEGG   Pseudomonas citronellolis: PcP3B5_26080
Entry
PcP3B5_26080      CDS       T04637                                 
Name
(GenBank) TraM recognition site of TraD and TraG
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pcq  Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:pcq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcq02044]
    PcP3B5_26080
Secretion system [BR:pcq02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   PcP3B5_26080
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 Cpta_toxin
Other DBs
NCBI-ProteinID: AMO76044
LinkDB
Position
complement(2880074..2882245)
AA seq 723 aa
MAQAYAIEVLLRPAVELYSVAVCAGAAALCLAAPWSLALNPSLGLGSALAFLVFGSIRLC
EALVILRYRRNLRRLPRYVMTSREVPVSQQRLFIGRGFRWEQRHTHRLMQTYRPEFRRYV
EPSATYNLARHLEERLEFAPFPVSCLARLTGWDSPFNPVRPLPPVGGLPRLHGIEPHESD
VSLPLAERVGQTLVLGSTRVGKTRLAELLITQDIRRRNTDGEFEPVIVFDPKGDGDLLKR
MYVEAKRAGREGEFYMFHLGWPNLSARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREF
AWRFVNIIARALVELGQRPDYLLIQRHVVNIDALFIEYAAHYFARTEPKAWEIIVQIEGR
LNDKNTPRNMIGREKRVVALEQYLSQVRVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLE
KLTTGKIAQLLAPDYADLADPRPIFDWMQIVRQRAVVYVGLDALSDAEVAAAVGNSMFAD
LVSVAGHIYKFGIDDGLPGGGSSSTLPINVHADEFNELMGDEFIPLINKGGGAGLRVTAY
TQTLSDIEARIGSRAKAGQTIGNFNNLIMLRVRETATAELLTKQLPKVDVYTTTLVSGAT
DSSDIHGSTAFTSTAQDRVTTSSVPLIEPAHLVSLPKGQAFALLQGGQLWKIRMPLPAPD
PDETIPADLQELAGYMRQHYAEAGEWWNGQELPGLQEGQLPDDLLEGVSPSASAGKGNDE
ARP
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcacaggcctatgcgatcgaggtgctgctgcggccagccgtagagctgtattccgtc
gcggtttgcgcaggtgccgccgcgttgtgtctggcggccccctggtcattggcgctgaac
ccgtcgctgggcctgggtagcgcgctggctttcctggtgttcggcagcatccgcctatgc
gaagcgctggtgattctccgttatcgccgcaatctccgtcgcctaccacgctacgtcatg
accagccgcgaagtaccggtcagtcagcaacgtctgttcatcggtcggggctttcgctgg
gagcaacgccacacccaccggctgatgcaaacctaccgaccggagtttcgccgctacgtc
gaaccctccgcgacgtacaacctggcccgtcacctggaggagcgcctggagttcgcgccc
ttcccagtgtcctgtctagccaggctcacaggctgggacagccccttcaaccccgtgcga
ccgctgcctccagtcggcggcctgccacggctacacggtatcgaacctcacgaatccgac
gtcagcctgccgctggccgaacgtgtcgggcagaccctggtgctgggctcgacgcgcgtc
ggcaagaccaggctcgccgaattgctcatcacccaggacatccgccggcgcaataccgac
ggcgagttcgaaccggtgatcgtcttcgatcccaaaggcgatggggacttactcaaacgg
atgtacgtggaggccaaacgcgctggccgcgaaggtgagttctacatgttccacctcggc
tggccgaacctctcggcgcgctataacgcggtgggccggttcgggcgcatcagcgaagtc
gccacgcgtatcgcgggacagctttcgggtgaaggcaactcggccgcattccgggagttt
gcctggcgtttcgtcaacatcatcgcccgcgcgctggtcgaattggggcaacgacccgac
tacctgctgatccagcggcacgtggtcaacatcgatgccctgttcatcgagtacgccgct
cactatttcgcccgcaccgagcccaaggcctgggagatcatcgtccagatcgagggccgg
ctgaacgacaagaacaccccgcgcaacatgatcggtcgggagaagcgcgtggtcgcgctt
gagcagtacctgtcgcaagtccgggtatatgaccccgtgctcgacggcctgcgcagcgcg
gtcagatacgaccgcacctacttcgacaagattgttgcaagcctcctaccactcctcgag
aagctgaccaccggcaagatcgcccaactgcttgcgccagactatgccgacctcgcggac
ccaaggccgatcttcgactggatgcagatcgtacgccaacgtgcggtggtctatgtcggc
ctcgatgcgctctctgacgcggaggttgccgcggccgtcggcaactcgatgttcgccgac
ctggtgtcggtagctgggcacatctacaaattcggcatcgacgatggcttaccaggcgga
ggtagcagcagtacgttgccgatcaacgtccacgcggatgagttcaacgaactgatgggt
gatgagttcattccgctgatcaacaaggggggcggagccgggctgcgggtcacggcctac
acccagacactctcggatatcgaggcgcgcatcggcagccgtgccaaagcaggccaaacg
atcggcaatttcaacaacctgatcatgctgcgggtacgggaaaccgccaccgccgagtta
ctgaccaagcaattacccaaggttgacgtctacaccaccaccctggtcagcggtgccacc
gacagctccgacatccatggctcgacggccttcacctccaccgcccaggaccgtgtcacc
acttcgagcgtgcccctgatcgagccggcacatctggtcagcttgccgaagggccaagcg
ttcgcccttctgcaaggcggtcagttgtggaagattcgcatgccgctgccagcccccgat
ccggacgagaccattccggcggatctacaggaactcgcaggctacatgcgacagcactat
gccgaagcgggcgaatggtggaatggccaggagctgccaggccttcaagagggccaactg
cctgatgacctgctcgaaggcgtttctccctcagccagtgccggcaagggcaacgacgag
gcccggccatga

DBGET integrated database retrieval system