KEGG   Pseudomonas citronellolis: PcP3B5_27230Help
Entry
PcP3B5_27230      CDS       T04637                                 

Definition
(GenBank) Putative DNA ligase-like protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pcq  Pseudomonas citronellolis
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pcq00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    PcP3B5_27230
Enzymes [BR:pcq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PcP3B5_27230
DNA repair and recombination proteins [BR:pcq03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PcP3B5_27230
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2999095..3001647
Genome map
AA seq 850 aa AA seqDB search
MASDTPSLEEYARRRDFSGTPEPRGEAPGHQAGELEFVVQKHDASHLHYDFRLELDGVLK
SWAVPKGPCLDPSVKRLAIEVEDHPLEYAGFEGHIPEGHYGAGDVIVWDRGRWQPLGDPR
QGLENGHLKFRLEGSKLHGSWNLIRTRMAGRKPQWFLVKGRDDEARDFPRHDILAEAPQS
VLSGRTLPGEAAPAQKPADPPRRAAAAKAPRRKAAKAGAMPERISPELATLLDAPPEGDW
RYELKLDGYRILARVEKGEVRLQTRNGHDWAERLPDICAALRALPLESAWLDGEILVVDE
EGRPDFQRLQNAFDVGASDEVRYTLFDLLWLDGEDLRRQPVEQRRAMLAGLLKHNASDRL
RYSEDFTDDPRSILDSACRLGLEGLIGKRAGSVYVERRSTDWIKLKCKRRQEFVILGLTP
PKGSRRHFGALLLGLHDDQGELRYAGKVGTGFDAATLKRVHDSLRPLASKTCPLASPPRG
QAFQGVTWLRPERLCEVAFAEMTREGLVRHAVFHGLRNDKPAKAIVEERAKPAAGEGAQP
TAKRPRKAAKDDAKVAGVAITHPERVIDAASGLRKLDLARYYERAAEHILPWLGDRPVSL
LRAPDGVGGEVFFQRHASRNAMPGVEQLDPRLDPGHAPLLRIATAKALAGAAQMGVVELH
TWNARVDDLEHPDRFVLDLDPDPSLPWARMIEATRLTLAVLDELGLACFLKTSGGKGMHI
LVPLERRHGWDEVKDFAHAITRHLARQMPDRFSAVSGPKNRVGRIFVDYLRNSRGASTVC
AWSVRAREGLPVSVPVAEGELDALRGANAWNLGSIDERLALKGEDDPWTSWGETRQRLTR
RMWQQLGEER
NT seq 2553 nt NT seq  +upstreamnt  +downstreamnt
atggccagtgatacgccgagcctggaggagtacgcccgccgccgtgacttcagtggcacg
ccggagccgcgcggcgaggcccccggacaccaggccggggaactggagttcgtcgtccag
aagcatgacgccagccacctgcactacgacttccgcctggaactcgatggcgtgctcaag
agctgggcggtgcccaaggggccctgcctggacccttcggtgaagcgcctggccatcgag
gtggaggaccacccgctggaatacgccggcttcgagggccacatccccgagggccattac
ggcgccggcgacgtcatcgtctgggaccgcggccgctggcagcccctgggcgacccgcgg
cagggcctggagaacggccacctgaagttccgcctggaaggcagcaagttgcacggcagc
tggaacctcatccgcacgcgcatggccgggcgcaagccgcagtggttcctggtcaagggg
cgcgacgatgaggcccgcgacttcccccgccacgacatcctcgccgaggcgccgcagagc
gtgctcagcgggcggacgctgcccggcgaggcggcaccggcgcaaaagccggccgacccg
cccaggcgcgccgccgcggccaaggcgccgcgccgcaaggccgccaaggccggcgccatg
cccgagcgtatctccccggaactggccacgttgctggatgcgcccccggagggcgactgg
cgctacgagctgaagctcgacggctaccgcatcctggcacgggtggaaaagggcgaggtg
cgcctgcagacgcgcaacggccacgactgggcggagcgcctgccggacatctgcgccgcg
ctgcgcgccctgccgctggagtcggcctggctcgacggcgaaatcctggtggtggacgag
gagggccgcccggacttccagcgcctgcagaacgccttcgacgtcggcgccagcgacgag
gtgcgctacaccctgttcgacctgctctggctggacggcgaggacctgcgccggcagccc
gtggagcagcgccgcgccatgctggccgggttgctgaagcacaatgccagcgaccgcctg
cgctactcggaggatttcaccgacgacccgcgcagcatcctcgacagcgcctgccgtctg
ggcctggaagggctgatcggcaagcgcgccggtagcgtctatgtcgagcgccgctccacc
gactggatcaagctcaagtgcaagcgccgccaggaattcgtcatcctcggcctgaccccg
cccaagggcagccgccggcatttcggcgcgctgctgctgggcctgcacgacgaccagggc
gaactgcgctacgccggcaaggtgggcaccggcttcgacgccgccaccctcaagcgggtg
cacgacagcctgcgcccgctggccagcaagacctgcccgctggcctcgccgccgcgcggc
caggccttccagggcgtgacctggctgcgccccgagcggctctgcgaagtggcctttgcc
gaaatgacccgcgagggcctggtgcgccacgcggtgttccacggcctgcgcaacgacaag
cccgccaaggcgatagtcgaggaacgcgcgaagccggcggccggggagggcgcgcagccc
acggcgaaacgcccgcgcaaggcggcgaaggacgacgcgaaggtggccggcgtggccatc
acccaccccgagcgggtgatcgacgccgccagcggcctgcgcaagctggacctggcgcgc
tactacgagagggccgccgagcacatcctgccctggctcggcgaccgtccggtatcgctg
ctgcgcgccccggacggcgtcggcggcgaggtgttcttccagcgccacgcctcgcgcaac
gccatgcccggagtggaacagctggacccgcgcctggacccgggccacgcgccgctgctg
cgcatcgccaccgccaaggccctggccggcgccgcacagatgggcgtggtcgagctgcac
acctggaacgcccgggtggacgacctggagcaccccgaccgcttcgtcctcgacctggac
cccgaccccagcctgccctgggcgcggatgatcgaggcgacccggctgaccctcgcagtg
ctcgacgaactgggcctggcctgcttcctcaagaccagcggcggcaagggcatgcacatc
ctggtgccgctggagcgccgccacggctgggacgaggtcaaggacttcgcccacgccatc
acccgccacctggccaggcagatgccggaccgcttcagcgccgtatccgggccgaagaac
cgcgtcgggcggatcttcgtcgactacctgcgcaacagccgcggcgccagcaccgtgtgc
gcctggtcggttcgcgcccgcgaaggcctgccggtgtcggtgccggtggccgagggcgag
ctggatgcgttgcgcggcgccaatgcctggaacctgggcagcatcgacgagcgcctggcg
ctgaagggcgaggatgacccctggacgagctggggcgagacccggcaacgcctgacgcgg
cggatgtggcagcagttgggcgaggagcgctga

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