Psychrobacter cryohalolentis: Pcryo_0123
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Entry
Pcryo_0123 CDS
T00350
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pcryo_0123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcr03019
]
Pcryo_0123
Enzymes [BR:
pcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Pcryo_0123
Messenger RNA biogenesis [BR:
pcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pcryo_0123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABE73907
UniProt:
Q1QEJ6
LinkDB
All DBs
Position
145835..148096
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AA seq
753 aa
AA seq
DB search
MAERAAKQLELNKSELPNSITEVIATLTRAGFDAYIVGGGVRDTLLGLRPKDFDAVTDAK
PHEIKDVFGKRCRIIGRRFQLAHVYSGRELIEVATFRGPPINDSNTNQDGMILRDNVWGD
IKQDFARRDFSINALYYQPLKGIVHDFCDALEDIDNKIIRLLGNAPIRIEEDPVRLLRAL
RFKAKLGFEFDSELAAQFHDGNWSLLEQISPHRLYDETQKMFTGGYLVPLLPLLFDSGAI
DSLIIYPPSEPSALVKQVAINTDKRIAAGKSINPAFFYAALLWENYLHQLEKAKKRNMPF
ADAQMHAAGKVIDRQRIKTAIPKFAEQFIRDIWILQPKLAAPRSKQIVQLSEHPRFRAGF
DFLLLREQCGDAEHPLSESTNDMGEWWQTYQTLTEQQQDQAIDDFDENIRRGAYKQGQRG
RGRNRQKQQHSNDNAKLSQLDNDYQGKALSNGHAKPAMVNDASNVPSRRRRASQHTSANS
KSYSPQQLTQDNNELAQLQQLSLASSNNGSNQQHMPKPAPLFVIEHSNVVPPLKKQLSGS
DKALPKATQKAPIQKVLEQATVSKKASADSQSQLQEKAVNKASDLTNRSHTPKESVNTQV
SSTNARSSAYAERNVAQSPALVSMNNEPIPHKRRRRQPTVIENSGIVAEASSAKEATTID
TSSNEKSSGKYAKKVPKPAVHSTDNVIDKAPKPAKASSTKSTKAKRDASGQSATNQSSNE
QQDANKVANSNMNANKGPVPSKRRRRQPSVNDV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgtgccgccaagcagttagaactgaataaatctgaattacccaattctatt
accgaagtaatcgcaaccctaacccgagctgggtttgacgcctatatcgtcggtggtggc
gtgcgtgataccttgctaggactgcgtccaaaagattttgacgcggtcactgatgccaag
cctcatgagattaaagacgtctttggtaagcgctgccgtattatcggtcgccgttttcag
ttggcgcatgtgtactctgggcgtgagcttatcgaagtagccaccttccgtggtccacct
attaatgattctaataccaatcaagacggtatgattctgcgcgacaatgtatggggtgat
atcaaacaagactttgcccgtcgtgatttttctattaatgccctttattatcagccgctc
aaaggcatagttcatgatttttgcgacgcgcttgaagatattgataataaaattatccgt
ttattaggcaatgcgccgattcgtatcgaagaagatccggtcagattgctgcgtgccttg
cgtttcaaagcaaaattgggttttgagtttgatagcgaattagccgcacagttccatgat
ggcaactggtcattacttgaacaaatctctccgcaccgtctatatgatgaaacgcaaaag
atgtttaccggtggttatttagtaccattattaccgttattgtttgattcaggcgcgatt
gatagtcttatcatttatccgccttctgagccaagtgccttagttaaacaagtcgctatt
aataccgacaaacgtattgctgctggcaaaagtatcaacccagcattcttttatgccgct
ttgctgtgggagaactacttacatcaactagaaaaagccaaaaagcgcaatatgcctttt
gcggatgcacaaatgcatgcagcaggcaaagtgattgatcgtcaacgtatcaagactgcc
attccaaaatttgctgaacagtttattcgtgatatctggatattgcagccaaaactggcc
gcgccgcgtagcaaacagattgtacagctatctgagcatccacgttttcgtgccggtttt
gatttcttattattgcgcgagcagtgcggcgatgcagagcatccactttctgaatcgact
aatgatatgggcgagtggtggcagacctatcaaaccttgactgagcagcagcaggatcaa
gcgattgatgactttgatgaaaatatccgccgcggtgcttataaacaaggtcagcgtggt
cgtggacgcaatcgtcaaaagcagcagcattcgaatgacaatgctaagttgagtcagttg
gataatgactatcaaggtaaagcgctgagtaatggtcatgcaaaaccagcaatggttaat
gatgcctcaaatgtgccatcacgtcgtcgccgtgccagtcagcatacttctgctaatagt
aaaagttatagcccgcagcaactcacacaagacaataatgagctggcacagttgcagcaa
ttgtctttggcgagcagtaataatggtagcaatcagcagcacatgccgaaacctgcacca
ttgtttgtcatagaacacagcaacgtcgtaccgcctttgaaaaagcagctatctggttca
gataaagcactgcctaaagcgacgcaaaaagcgcctattcaaaaagtgcttgagcaagca
acagttagtaaaaaggcatcggctgatagtcaatcgcagctgcaagaaaaagctgttaat
aaagcgagtgacttaactaatagatcgcatacaccaaaagagtcagtgaatactcaggtg
tcttcaactaatgctcgtagctccgcttatgcagagcgcaacgtcgcgcagtcaccagca
cttgttagtatgaataatgagccgataccgcacaagcgccgtcgtcgtcagcctactgtg
attgaaaatagtggtattgtcgcagaggctagcagtgctaaagaagcaacgacaatagac
accagtagtaatgagaaatcatctgggaagtacgcaaaaaaagtgcctaaaccagctgtt
cactctactgataacgtcattgataaagcaccgaaacccgctaaagcatcaagtactaag
tctactaaagctaaacgagacgctagtggtcaaagtgctactaatcaaagttctaacgaa
cagcaagatgctaataaagtagctaacagtaatatgaatgccaataaaggtcctgtgcca
tcgaaacgtcgccgtcgtcagccaagcgtcaatgacgtttaa
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