Penicillium rubens: N7525_008061
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Entry
N7525_008061 CDS
T01091
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pcs
Penicillium rubens
Pathway
pcs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
N7525_008061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcs03400
]
N7525_008061
Enzymes [BR:
pcs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
N7525_008061
DNA repair and recombination proteins [BR:
pcs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
N7525_008061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
8315523
NCBI-ProteinID:
XP_002568532
UniProt:
B6HJG3
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MGFKFTFLCDLLTSLDDSRTAKASTAAKNDNPDIRTVAQWFSRHGRTIHNANTDRVALLS
CMFPEKRTDRVYWLQATQLSRVIGRCLGLGSSRLSELNRWQRPGGSDLGGCVEIVMRQAE
NYIPAGQELSVEEIDRAMAMIASRCRFSGPHARRNRTAVDVEETLSKLYRRSSSRDAKWL
TRMILKSYSPVVFPEKYTLKKFHFLLPQLLQLQNSFEGALEMLASDPINHFPPNPDPQTA
KSLSAVALQHMRPRPGIKVGRPDYYKARSIKHCHQMANGRRMSIERKYDGEYCQIHVDLS
NKYTPIQIFSKSGKDSTADKDKIIPVIEETLRTGFPDCKFAHRCILEGELLVWNDQNCDL
MDFSKIRRFIPRSGIMIGVDNDSPPQPYEHLMIMFFDILLLDNDVCLAKPHRERRLLLQQ
VVKTIPGRAELAYQEVLDFNRPDSYHRLERSFEKAMTKHWEGYVLKASDEPYFPTYSTDT
DHMCGRWIKLKKDYIPGLGDTLDLALVGASYNTRDAPDLGQIKGLKWTHFFVACLLNPDQ
VKERGGLPRFRIIDVINRHRMSIQNMQILNQIGEFHARQPENFEWFHIEYGHQALPPPTT
LFKQPFIVEMLGSGFEKPSGARYFTLRFPRILKIHSDRTLEECTSFQGLQLSAEHARAVP
ADELEEREKWARRLEACSGLNLYVVRSPSPEATCSDTDEETHSPSSQVPQATTTSEESFM
DARPLMEALQEDSKRKGSHDYPLSPLVYVDETMPPTQNDENPVVEKTVLVDNDNLSSRQH
SSQKEGKIASQKSSGFLHPVQTSSFISTHEHFQQSHESQERLPDKPLMPTSSKHKRKMSP
QSPLTTIPIWTPETSLGSFTLPKFDGKSNDDHEYCDLNEFVQCLCSDESASSLRQSNPYA
ASQGTGFGIVLFVPKATQLGKEMHRLAKTLSNFVHTGTSPLPSIGSIFFLGSSMLEHDLR
PGDLRFCLRDMWTGIGRDHSYGCLSWNLSKHSDGISVGREQLRSDLDRRRYDMSKETPEH
GGSGPRPPWIEITFDETAIAVLGEYSSIEPLVHVLYS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaaattcaccttcttatgtgatctgttgaccagtctagatgacagcagaacg
gccaaggcatccacggcggccaagaacgataatcctgatattagaacagtcgcgcagtgg
ttctctcgacatggacggacaattcataacgccaacacagaccgtgtggcgttgctctcg
tgcatgttccccgaaaaacgcacggaccgagtatactggctgcaagctactcagctatcg
agagttattggccgctgcttgggcttgggatcgtcccgactttccgaactcaatagatgg
caaagacctggcggttctgatctcggagggtgtgtcgaaattgtcatgcggcaagccgag
aattacattccagccggccaggagttgtcggtagaagaaatcgatcgcgccatggctatg
attgcatcacgctgccgcttctctggccctcatgcccgccggaatcgtacagctgtggac
gttgaggaaactttatcaaagctgtaccgtcgatcaagtagccgcgacgccaaatggctc
acccgcatgattctcaaaagctactctcctgtcgtgtttccagaaaagtacaccctgaag
aaattccacttccttctgccgcaactgctccagcttcagaactcctttgaaggggcgttg
gagatgctcgcttcagacccaataaaccacttccctccgaacccagatccccaaacagcc
aaaagtcttagcgccgttgctctacaacatatgcgtcctcgtcctggtatcaaggtggga
cgacctgactattacaaagctcggagtatcaaacattgtcaccaaatggccaatggtcgt
cggatgagcattgaacggaaatacgatggtgaatactgtcagatccacgtcgatctctct
aacaagtatacccccatccagatcttctccaaaagtggcaaggactcgaccgcagataaa
gataaaatcatacctgtgatagaagaaacgctccgcactggatttcctgactgcaaattt
gcccaccgctgcatccttgagggagagctgcttgtatggaatgaccagaattgtgacctg
atggactttagcaaaattcggaggtttattccacgatctggcattatgattggagttgat
aatgattctccgccgcaaccgtacgagcacttgatgatcatgttctttgacattctcctc
ctcgataacgacgtatgccttgccaagcctcatcgggaaaggcgactactattacaacag
gtagtaaagacaatcccaggccgggcggaacttgcctatcaggaagttctggacttcaac
cgacctgatagctatcatcggctcgaacggagtttcgagaaagcaatgactaagcactgg
gagggatatgtcttgaaggcctctgatgagccttattttccgacatactccactgatacg
gatcatatgtgcggccgatggatcaaactcaagaaagattacatacccggtcttggagac
acattagatcttgcattggtcggagctagctacaacacgcgggacgctcctgatctggga
caaataaaagggctgaaatggactcacttttttgttgcctgtcttctgaaccctgaccag
gtcaaagagcgcggtggtttgccgcgtttccgaatcattgatgtgattaaccggcatcgc
atgagcattcagaacatgcaaatcctcaatcaaatcggcgagtttcatgcacgtcaacct
gaaaatttcgaatggtttcacattgagtatgggcaccaggcccttccccctccaacaacc
ttgttcaaacagcccttcatcgtggagatgctgggcagcggatttgaaaagccgtctggc
gccagatacttcacgcttcgatttccacggattttgaaaatacactcggaccgaacactg
gaagagtgtacgtcattccaaggcctgcagctttcggctgagcatgcccgggctgtgcct
gcggatgaacttgaagaacgcgagaaatgggcaagacgcctcgaggcttgcagtggactt
aatctgtatgttgtgcgatctccaagcccagaagcgacttgttcagacaccgacgaggaa
acccattccccgtcatcccaggttccccaggccaccactacttccgaagaaagttttatg
gacgcacgtccattgatggaagcgctgcaggaagattcaaaacggaaagggagccatgac
tatccactgtccccactagtctacgtcgatgagacaatgcctcccacacaaaatgatgaa
aaccctgttgttgaaaaaactgtactcgtcgacaatgataacctgtcgtctcgtcaacat
tccagccagaaggaaggaaagatcgcgtcccagaaatcttcgggctttttacatcccgtg
cagacaagcagtttcatatccacacacgagcactttcaacagtcacacgagtcgcaggaa
cggcttccggataagccattgatgccaacatcatctaagcacaaacgcaagatgtcaccc
caatctcctttgacaacaatccccatatggacgcctgaaacctcgctgggaagttttaca
cttcccaaatttgatggaaaatccaacgacgatcatgaatattgtgatctgaatgagttt
gttcagtgtctctgttctgatgaatctgcttcttccctccgacagtccaacccttatgcc
gcctcacaggggactggatttggcattgtcctgtttgttcccaaagcaacccaactaggg
aaagaaatgcaccgtcttgccaaaactctttccaacttcgtccatactggaacaagtcca
ctgccctccataggaagcatattcttcttgggatcaagcatgttggaacatgatctacgc
cccggcgaccttcgcttttgtttgcgtgatatgtggacaggtatcggacgtgatcattcc
tatggttgtctttcatggaatctcagcaagcattctgatggtatatccgtgggaagagag
caactacgctctgatttggatcgccgtcgttatgacatgtcaaaggagacaccagagcac
ggaggctctggaccaaggcccccatggattgagattacctttgatgaaaccgccattgct
gtgttgggcgagtatagctcgatcgaacctctagttcatgttttatatagttga
DBGET
integrated database retrieval system
