Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2235
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Entry
PC1_2235 CDS
T00934
Name
(GenBank) spermidine/putrescine ABC transporter ATPase subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_2235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_2235
Transporters [BR:
pct02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PC1_2235
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_25
AAA_22
nSTAND3
AAA_21
MIT_C
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ACT13273
UniProt:
C6DJ03
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Position
2568000..2569094
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AA seq
364 aa
AA seq
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MRNYVSFRNVQKTYDGDRLIVKNLNLDIREGEFLTLLGPSGSGKTTSLMMLAGFETPTQG
EILLRDAPLHHLPPHQRDIGMVFQNYALFPHMTVAENLAFPLSIRRLNRADIKEKVDRVL
DRVKLTSLADRYPAQMSGGQQQRVALARALVFEPKLVLMDEPLGALDKQLREHMQLEIKE
LHQSLELTVVYVTHDQSEAMTMSNRVAVFNDGVIQQMDSPSDIYEKPENAFVAQFIGENN
TLLATRAEAEGAFYRATLDDGTSLRALKVRPSSPGRKITLCIRPERVHVNAPHVDDSMQQ
VKARIQQFIYLGDHVRMMTEVAGQPQFMVKLPASEIQPHWKAGTEVNLSWRPEHLRALDS
IITH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattatgtcagcttcaggaatgttcagaagacctatgacggcgaccgtctgatc
gtcaaaaacctcaatctggatatccgtgaaggtgaatttctgaccctgcttgggccatcc
ggctcgggaaaaaccaccagtttgatgatgctcgccgggtttgaaaccccgacgcagggc
gaaattctgctgcgcgatgcgccgctgcaccatcttccaccacatcagcgtgacatcggt
atggtatttcagaactacgccctgttcccacatatgaccgtggcagagaatctcgccttt
ccattgtccatccgtcgcctgaaccgcgccgacatcaaagagaaagtggatcgagttctg
gatcgcgtgaaactcaccagcctggccgaccgctaccccgcgcagatgtccggcggccaa
cagcagcgtgtggcgctagcccgcgcgttggttttcgagcctaaactggtgctgatggat
gaaccgctgggcgcgctggataaacagctgcgcgagcatatgcagttggaaatcaaggag
ctgcatcagtcgctggagttaaccgtggtgtacgtcacccatgaccagagcgaagcgatg
acgatgtccaaccgcgtcgccgtgtttaacgatggcgtgattcagcagatggatagcccc
agcgatatctacgaaaaaccggaaaacgcctttgtggcacagtttatcggcgaaaataat
acgctgctcgccacacgcgccgaggccgaaggcgcattctaccgggcaacactggacgac
ggcacttcactgcgtgcgctgaaagtccgccccagttcgccgggtcgaaaaattacgctt
tgcatccgcccggaacgcgttcacgtcaacgcgccccacgtcgacgacagcatgcagcag
gtcaaagcccgcattcagcagttcatctatctgggcgatcacgtccggatgatgacggaa
gtggctggccaaccgcaattcatggtgaaactccctgccagcgagattcagccgcactgg
aaagccggcaccgaagtcaacttgtcatggcggccagagcacctgcgcgcgctggatagc
atcatcacgcattaa
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