Candidatus Protochlamydia amoebophila: PC_RS03080
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Entry
PC_RS03080 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PC_RS03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcu03019
]
PC_RS03080
03016 Transfer RNA biogenesis [BR:
pcu03016
]
PC_RS03080
Enzymes [BR:
pcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PC_RS03080
Messenger RNA biogenesis [BR:
pcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PC_RS03080
Transfer RNA biogenesis [BR:
pcu03016
]
Prokaryotic type
tRNA degradation factors
PC_RS03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
SPJ31675
UniProt:
A0A2P9H9J9
LinkDB
All DBs
Position
complement(810718..812811)
Genome browser
AA seq
697 aa
AA seq
DB search
MQRETISVPVGAQEIIFETGKIARQAGGAVVVRCGETVVFTTACAAPNADSTTDFLPLRV
DYQEKFSSAGKTLGGFIKREGRPTEKEVLVSRLIDRPIRPMFEEGYYNEVQLLSFVWSYD
GINSPEPLAICGASAALVISDIPLIKPVGAVRIGFIDAQFIVNPTIEQQKQSKLDLLIAG
TEEAVLMIEGFCDFLTEDQVLEAIEIGHRSIKTICQTLEQWRAKVGKPKNRETLRQLPKE
LYADVESIANPLLEKALRICEKQKREEALAEVTKAVNDRLMPENEEPKYPAKHIAYVIKD
VSSKMMRQMILNENVRSDGRTSTDIRFIDIEQSLLPRAHGSSLFTRGETQALAVCTLGGA
SMAQRFEDLEGEGNNRFYLQYSFPPYSVGEVGRVGAPGRREIGHGKLAERALMAVIPTKE
QFPYTIRLESNITESNGSSSMATVCGGCLALMDAGVAIKRPVAGIAMGLILENERFIILS
DILGIEDALGDMDFKVTGDQNGITAFQMDIKVEGITIEIMRVALKQAKEGRVHILNKMLA
VCPTYKGEMSRYAPRIETIQIKPSKIAVVIGPGGKQIRAIIEQTGVQIDIDDTGLVNIAA
IDLVSIEKAKAIIHGLTAEIEIGRIYSGKAISIAPFGVFVEILPGKEGLCHISEFDVNRI
NSLDEFVKQGDMLMVKVLDINERGQIKLSRKATLQSQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgaaactatttcagttcctgttggtgcacaagaaattatttttgaaacaggt
aaaattgctcgtcaagctggaggagctgttgttgtccgatgtggagaaacagttgtcttc
acaacggcttgtgccgccccaaatgctgattccacgaccgattttttacctcttcgtgtt
gattatcaggaaaaattttcgtcagcaggtaaaacacttggtggatttattaaaagagaa
ggtcgcccgactgagaaagaagttcttgtttctcgtttaattgatcgtcctattcgccca
atgtttgaagaaggttattacaatgaagttcaacttctttcttttgtttggtcttatgat
ggaattaactcaccagaacctctagcaatttgtggagcttctgcagctctagtcatttcc
gatattcctcttattaaacctgttggagctgtacgtatagggtttattgatgctcaattt
atcgtcaacccaactatagaacaacaaaagcaatctaaactagatttgttgatagcagga
accgaggaagctgttttaatgattgaaggcttctgtgatttcttaacagaagatcaagta
ttggaagctattgaaataggccatcgtagcatcaaaacgatttgccaaacacttgaacag
tggcgtgcaaaagtgggtaaaccaaaaaatcgtgaaactcttagacaattaccaaaagaa
ttgtatgcagatgtagaatcaattgcgaatcccctcttagaaaaagcactccgaatttgt
gaaaagcaaaaacgggaagaagccctagctgaagtcaccaaggctgtcaatgatcgtttg
atgccagaaaacgaagagcctaaatacccagccaaacatatcgcttatgtcattaaagac
gtctcttctaaaatgatgcgtcaaatgattttaaatgaaaatgttcgttccgatggaaga
acatcaacagatatacgatttattgatattgaacaaagtcttctcccccgtgctcacgga
agctctttatttacaagaggtgaaacacaagcattagctgtatgtacattgggcggtgct
tcaatggcacaacgatttgaagatttagaaggagaaggtaacaaccgtttctacttacaa
tattcttttcctccttactcagtcggagaagtaggaagagttggagctccgggaagacga
gaaatcggacatggaaagttagcggaaagagctttaatggcagtcatccccacgaaagaa
caatttccttacacaatccgtttggaatctaacattacagaatctaacggatcctcttct
atggcaactgtttgcggaggctgcttagcgctcatggatgcaggtgtggctattaaacgt
ccagttgcgggaatcgcaatgggactaatattagaaaatgaacgctttattatcctatca
gatattctgggaattgaagatgcgctcggtgatatggatttcaaggtaaccggagatcaa
aacggcattactgctttccaaatggacatcaaagtagaaggcattaccattgaaattatg
cgggttgctttaaaacaagctaaagaaggccgcgtccatatcctaaataagatgctagct
gtatgcccaacgtataagggtgaaatgtctcgttatgcaccacgcattgaaacgatccaa
attaaaccaagcaaaattgcagttgttatcggcccaggtggaaaacaaatcagagcaatc
atcgaacagacaggtgttcaaattgatattgatgatacgggtcttgttaacattgctgcc
atagatttagtaagcattgaaaaagcaaaagccattattcatggtctgaccgctgaaatt
gagattggtagaatttattctggaaaagccatttctattgcaccctttggtgtttttgtg
gaaatccttcccggtaaagaaggcctttgccatatttctgaatttgatgtaaatcgtatc
aacagcttagatgaatttgtaaaacaaggtgatatgctcatggtaaaagttctcgatatc
aacgaacgaggacaaattaaattgagccgcaaagccactttacaaagtcaatag
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