Psilocybe cubensis (magic mushroom): JR316_0003836
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Entry
JR316_0003836 CDS
T08288
Name
(RefSeq) Transcription elongation factor SPT6
Organism
pcub
Psilocybe cubensis (magic mushroom)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Spt6_S1
HHH_9
SH2
S1
HHH_3
Motif
Other DBs
NCBI-GeneID:
71970157
NCBI-ProteinID:
XP_047751980
LinkDB
All DBs
Position
3:complement(3067100..3072393)
Genome browser
AA seq
1557 aa
AA seq
DB search
MSSPDPDTVPSHDPLADNDDPMRGSGDEEEEGEGDAVMPGISDDSSEEGEDDEEEARRIR
DGFIVSEEEEDSEEEAPRRKRRKRRKKHHRAEEETLEDDDLELLEENTGVAYKRPNRLTR
LRRHDSDSPPAASSSKRRAVVESSEDDLDNDEDTHEVPDIRKIWDDDRRGEDDDEDMSDF
IDYSEDEEGAAMNEEAREARRLEKKEEQSRRKRARARPELVGIDAIAWDEIHEVFGDGHE
YDWALVGDDEADLEEDRYKPDMKYQDVFEPSEIKKRMLTEDDDLIRVQDIPERMQLATST
LSETSSLSTHIRLTEEDLGDAAMWVTTRLSHQKQKEYFGSDGSHQQLQGALVLAVTFALR
QIFVEEYEVPYTWAHKQDYITHFDTNGGPSVHLLSLPELWQIYNLGQKYRSLLERRHVLT
ALYERLQVTDDYFTVEILPQIDSVELVADATEWLNMKYKNKRPDYISDFRFHDDDEPEAA
KRRKMPSRVSAYELTKKSVVSKLAEGFGIKPHDIVLNLLAETHTHFVEDTELHPVAFAEQ
FSDPDPSKALAPEELLRRARMIISTELGKDPLLRNQIRKIFKENAHVSVEPTERGITKID
ESHPYFNFKYLLQKPIDEMLTTPQFLLILAAESEHLVTVTISIPPAVKADFERRLSDAFA
SDNFSESAKAWNAERLLVVHETLEQHLIPAGVKWTREYVREEAEDFLASKCSERLRERVN
VAPYATAREPRYGEGTASVLAISWGKGDPHKDAITLVYVDEAGRMREHTKIDNLHDQDNL
DEFKDLVSRRKPDVAVVGGFSIVTLKLMNRVKEILGSPSDPNSGEQAWTQPTEEGFNIPA
IYVFDDVARIYQHSKRAADEFSALSPTAKYCVGLARYVQSPLNEFAALGSDIAAISFDEE
SQNLIPKEKLLSAFEQVLVDVTNKVGVDINRAVTDPYYQHVLPFVCGLGPRKAQMLVKKI
ASQGGTIVNRDQFIKAGLLTTKIFLNAAGFLRVIQDRDNSRPGKYRPDDENAPDPLDDTR
IHPEDYELARKMATDALELDEEDIHDEHPSQVVTSIMNDGDKERKLTELNLGEFATSLFQ
ANQDQKRHTLDVIREELVMPFREKREKFLLPKDWDIVTMLSGETPKTLGVGLIVSALVYR
TTPDSVGVRLDSGIEGFISTEFLPEMGRKPRDVMKKGQTITGIVIDLIFRLRQDEFLVSL
STRPGDLDGGDYLFRNVRPDQRYWDDTHYKKDQDMLARKKRAETDRTRRVIKHPNFHNFN
TAQAEAYLEKQQRGDVVIRPSSKGINHLAVTWKVDERLYQHIDVTEMNADPTGQTIGGQL
VVDANHIYSDLDELIVNHVQAMSRRVEELMAHEKFKHGSEDDLHIFLKNFLAANPSKSMY
GFTLNRKKPGHFNLCFLANKNSTVQTWPIRVAPEAYYLFDAPAVGVPELCDAFKVRHLHE
SQNVAAAAAGGKTPYGAGARTPARIGGATPGHLSIRNPGRTPNPYGGAHTPFVPPHHTQG
PPSNYMPPPPTSYAGYQTPSLRPPVYGQHPHPPMGGPPPNMNPPRPGSVWGGGGGWS
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccagaccctgacacagtaccgtcgcacgatcctttagctgacaatgatgat
cctatgcgtggctcaggtgacgaagaagaagaaggtgaaggtgatgcagtcatgcctgga
atatcagacgacagttccgaggagggggaagatgacgaagaagaggcacgcagaattcga
gacgggttcattgtttctgaagaagaagaagactctgaggaagaggctcctcgtcggaag
cgcagaaaacgtagaaagaaacaccaccgtgcagaagaagagacgttagaagatgacgat
ttggaactattggaagagaatacgggagttgcatataaaagacccaatcgcttaacccgc
cttcgtcgccacgactcagattctccaccagccgcgtcttcttcaaagcgtcgggcagtt
gtagaatcatcagaagatgacctcgacaacgatgaggacacacacgaagttcctgatatt
cgcaagatttgggacgatgatcgtcgtggagaagacgatgatgaggatatgtcggatttc
attgattatagtgaagatgaagagggtgcagctatgaatgaggaggctcgcgaagctagg
aggcttgagaagaaagaggaacaatctcgacgcaaaagagcaagggcgcgcccggagttg
gttggaattgatgcaattgcttgggacgaaatccacgaagttttcggcgatggacacgaa
tatgactgggctttggtcggcgatgatgaagcggacctggaagaggaccgttataagcca
gacatgaagtaccaagatgtgttcgaaccatcagaaatcaaaaaacgaatgctcactgaa
gatgatgacctcatccgtgtccaagatattccagaacgaatgcagctggccacctccacc
ctttctgaaacgtcgtctctctctactcatattcgattgacagaagaggaccttggagat
gctgccatgtgggtcaccacacgtctttctcaccagaaacagaaagagtacttcggcagc
gatggtagtcatcagcagctacaaggagcccttgtactggctgtgacctttgctttgcgc
caaatctttgtagaagaatatgaggttccttacacgtgggcccacaaacaagactatata
acccatttcgataccaacggcgggccttccgtgcatcttctcagcctccccgaactttgg
caaatctacaacctcggccaaaagtatagatcacttctagagagacgtcacgttttaaca
gcgctgtacgagagattgcaggtcaccgacgattactttacagtggaaattcttccccaa
attgacagtgttgaactcgttgctgatgccactgaatggctcaatatgaaatacaagaat
aaaaggccggattatatctccgactttcgattccatgacgacgatgagccagaggcagca
aagagacgaaaaatgcccagtcgagtttctgcttatgagctcacgaaaaagagcgttgtt
tctaagctcgccgagggatttggtatcaaacctcacgatattgtcttgaatctcctggcc
gaaacacatacccattttgttgaagacaccgaactacaccccgttgcgtttgcggagcaa
ttttctgaccctgatcctagcaaagctctggctcccgaggagttgcttcgacgagcacgt
atgataatctcaactgaactaggaaaagatccccttctgcgtaaccaaattcgcaaaatc
ttcaaagaaaatgcccatgtttccgtcgaacctaccgaacgaggcattaccaaaatcgac
gagagccatccttattttaacttcaaatatctattgcagaagccaattgacgaaatgttg
accaccccgcaatttttgctcatactagcagcagaatcggaacatttggtaacagttacg
atttctatccctcctgctgtcaaggcagattttgagcggcggctcagtgatgcgttcgcc
tccgataatttcagtgaatctgccaaagcgtggaatgcagaacgcctgctcgttgtccat
gagactctagaacagcatttgatacccgctggagtgaagtggacccgagaatatgttcgc
gaggaggcggaagactttttggctagtaaatgcagcgaacgtttacgggagcgggttaat
gttgcaccttatgctactgctcgtgaacctaggtatggcgagggtacagcttctgttttg
gctatttcttggggcaaaggagaccctcataaggacgctattactttggtctatgtcgat
gaagccggaagaatgcgcgaacataccaaaatcgacaatcttcacgatcaagacaacttg
gatgagttcaaagaccttgtatcaaggcggaaacctgacgttgctgttgtcggtgggttc
agcatcgtcacgctgaaacttatgaatcgagtcaaggaaatacttgggtcacctagtgac
cctaattcgggtgaacaagcatggactcaaccgacagaggagggtttcaatattcctgcg
atatatgtgttcgacgacgttgcacgcatttatcaacatagcaagagggctgcggatgaa
tttagtgctctctcaccaactgccaagtactgtgtcggtctagcccgctatgtacaaagc
cctctcaatgaattcgccgctttaggatcagacatagcggctatctcatttgacgaagaa
agtcaaaacttgattccgaaggaaaagttgttgtctgccttcgaacaggttctcgtcgat
gtgaccaacaaagtgggtgtagatataaaccgagctgtgacagacccgtattaccagcat
gtacttccctttgtttgtggtcttggtcctaggaaagcacagatgctcgtcaagaagata
gcttctcaaggaggcaccattgtgaaccgtgatcaatttatcaaagccgggctcttgact
acaaaaatattcttgaatgcagcagggtttttgcgtgttatacaggatcgtgacaacagt
aggccaggaaaatatcgacctgatgacgaaaacgcccctgacccactcgatgatacgcgc
attcatcccgaggattacgaacttgctcgcaagatggctacagatgcactcgaattggat
gaagaagatatccacgatgagcacccatcgcaagtagttacttcaatcatgaatgacggc
gacaaggagaggaagctgactgaactgaatctgggagagtttgccaccagcttgttccag
gccaatcaggatcaaaaacggcacactctagatgtcatccgtgaagaacttgttatgccc
ttccgagaaaagagggagaagttcctccttccgaaagattgggacatagtcaccatgctc
agcggagagacgccgaagacgcttggtgtagggctcattgtttcagcgctagtatatcgc
acgactccggattcggtcggcgtccgtcttgactctggtattgaaggattcatctcaact
gaattccttcccgagatgggtcggaaacctagagatgtaatgaagaaaggccaaacgata
actggaattgtcattgacctgatatttcgtctacggcaagatgaatttttggtcagtctt
tcgacccggcctggtgatttagacggaggcgattatctattcagaaatgttcggccagat
caacgctattgggacgatactcattataagaaggatcaagatatgttggccaggaagaaa
cgggccgaaacagatcgaactcgtcgtgttattaaacaccccaacttccacaatttcaat
accgcccaagctgaggcgtaccttgaaaagcaacagcgtggagatgttgtaattcggcca
tcttccaaaggcattaatcatcttgctgttacatggaaagttgacgaaagactttaccag
catattgatgttaccgaaatgaacgccgaccctactggccaaacaatcgggggacagctt
gttgtcgacgcgaaccacatctactctgacttggacgaacttatagtcaatcatgtccag
gctatgagccgtcgcgtggaagaactgatggctcatgaaaagttcaagcacggttcggaa
gatgatctgcacatatttttgaagaacttcttggctgctaacccttcgaagagtatgtac
ggctttacacttaacagaaagaagccaggtcacttcaacctgtgctttttggccaacaag
aactccactgttcagacctggcctatccgagttgcacctgaagcatactacctgtttgat
gctcctgcagtgggggtaccggagttgtgcgatgcattcaaagtacgacacctccacgaa
tcacaaaatgtggcggccgcagctgcaggaggaaagacaccgtatggtgctggtgctcga
acccctgctcgtattggtggtgccactccagggcatttgtcaattcgcaatccaggtcgt
actcccaacccttatggaggcgcacacacaccctttgtccctccacatcatactcagggg
cctccttcaaactacatgccacccccacccacgtcatatgccggttatcagacaccatct
ctccgccctccagtttatggtcaacacccgcacccgcctatgggtggacctccacccaat
atgaaccctcctcgtcccggcagtgtgtggggtggaggtggaggttggagttga
DBGET
integrated database retrieval system
