Phascolarctos cinereus (koala): 110196310
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Entry
110196310 CDS
T05867
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110196310 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110196310 (POLR1A)
Enzymes [BR:
pcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110196310 (POLR1A)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110196310 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
110196310
NCBI-ProteinID:
XP_020825136
UniProt:
A0A6P5J1S6
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MLVSKEVPWRRLRGISFGMYSAEELRKLSVKSITNPRYVDNVGNPSVNGLYDLSLGPADS
KEACSTCVQDFGSCPGHLGHIELPLMVYNPLLFDKLYLLIRGSCLNCHLLTCPRPVVHLL
YCQLRVLEVGALQGVYELESTLNRFLEENPNASIHEIQEELEQHTRVILENNLLGAQGSQ
VKNVCESKSKLIAHFWKAHMASKRCPHCKTGKSVVRKEHNSKLTVTYPAVVHKKASGEED
KAKKTAAPEIDEAHLGKRGYLTPSTAREHVLALWENEGFFLNCLFSGVEDTGAESKFNPN
IFFLDLVVVPPSRYRPVNRLGDQMYTNGQTVNLQAVLKDVVLIRKLLALMAQEQALPSEG
VAVTGKEIQNGSPEETGSSVPVDRSFLAMIPGQSLTEKLYGIWIRLQSHVNIVFDSDMDK
LMMEKYPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTY
PQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSATDVTQREAVAKQLLTPATG
APKPQGAKVVCRHVKNGDVLLLNRQPTLHRPSIQAHRARILPSEKVLRLHYANCKAYNAD
FDGDEMNAHFPQSELGRAEACVLACTDEQYLVPKDGQPLAGLIQDHMVSGARMTTRGCFF
TREQYMELVYRGLTDRVGRVKIFPPAILKPCPLWTGKQVVSTLLINIIPENHIPLNLIGK
AKISGKAWIKQSARAAPACGLDAMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEV
YGGETSGQVLTCLARLFTAYLQLYKGFTLGVEDILVRPLADAKRQAVIEESSHCGSRAVR
AAFNLPDLASCEDVQTKWQDAHLNKDQRDFNMVDLKFKEEVNHYSNEINKACMPFGLHRG
FPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEVTPRSG
GFVTGRFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVR
DSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLLSNYEAIRKSKHLDEVLSRMDPTQAQQH
FRALRKWRARHPPTCPRHGAFLSYSQKVQAAVRSLNLPGGSQNGRDPSAQEILKMWSELD
EKSRRKYVKRALPCPDPSLGVWRPDIHFASVSETFENQVDAYAQEWAAQAERSYEKSELS
LDRLKTLLHLKWQRALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRL
REILMVASSNIKTPMMSVPVLNTKRALKRVRSLKKQLTRVCLGEVLQKVDVQESFCMEEK
KDKYRVYCIRFNFLPYKYYQQEKYLRPEDILHFVEARFIKLLLEAIKRKSSKTSSFKAVS
TRRATQQDLDGGGEMPGSREDREGDDEGEEQIVDGDAEEGDADATDKKWKKKQEEEVDYE
SEEEEQEEENEEENEREEEGSQGPDTEQPAPSSLAPSKKRAHRHGPSGAEAELRVQAVRN
IHSSIQDYTFDVEKGLWCEVTLKLPLMKVHFDLCSLVVSLAHSAVVYETKGITRCLLNDT
TNKKQEKELVLNTEGINLPELFKYTDVLDLSRLYSNDIHAMANTYGIEAALRVIEKEIKD
VFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSFKFLKEATMM
GAHDELRSPSACLVVGKVVKGGTGLFDLKQPLR
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgctggtctccaaggaggttccatggcggcgccttcggggcatttccttcgggatgtac
tcggctgaagagctcaggaaactaagtgtcaaatccatcacaaaccctcgatacgtggac
aatgtggggaacccctcagtgaacggtctgtatgatttatccctgggaccagccgactcc
aaagaagcatgttctacctgcgtgcaggactttggcagctgccctgggcacctgggccac
attgagctccccctgatggtctacaatcctctgctctttgataaactctacctgctgatc
cggggctcttgtctcaactgccacctgctgacttgtccccggcctgtggttcacctcctc
tactgccagctgcgggtcctcgaggttggggcacttcagggtgtctatgaacttgagagt
accttgaacaggtttctagaagaaaaccctaatgcttccatccatgagattcaggaagaa
ttagagcagcacactcgggtaatcctggaaaacaacctgctgggagcccagggctcacag
gtgaagaatgtttgtgagagtaagagcaagctgattgcccacttttggaaggcacatatg
gcttctaagagatgcccccattgcaaaactgggaagtcagtggttcgcaaggagcacaac
agcaaactgactgtcacctaccctgctgtggttcacaaaaaggccagcggggaagaggac
aaggccaagaagacggcagccccagaaatcgatgaagcccatttggggaaaaggggctac
ttgacccccagcactgcccgagaacatgtcttggccctttgggagaatgaaggtttcttt
ctgaactgccttttctctggagtagaggatactggtgcagagtccaaattcaatcccaat
atcttctttttggatcttgtggtggtaccgccttccaggtatcgcccagtcaaccgcctc
ggggaccagatgtataccaacggccagacggtgaacttgcaggctgttttgaaggatgtg
gttctgatccgaaagcttctggctctgatggcccaagaacaggccctgccgagtgagggg
gtggcagtgacagggaaggagattcagaacggctccccagaggagacagggtcttctgtt
ccagtggaccgctcctttcttgccatgattccaggccagtctctcacagagaagctttat
ggcatttggatccgccttcagagccatgtcaatattgtgtttgacagcgatatggacaag
ttaatgatggagaagtaccctggcatccgacagatcttggagaagaaggaaggcttgttt
cggaagcacatgatggggaagcgtgttgactatgctgctcgctcagtcatctgcccagac
atgtacatcaataccaatgaaattgggatccccatggtgtttgccacaaaactgacctac
cctcaaccagtgactccttggaacgtccaggagctgaggcaagcagttatcaacggcccc
aatgtgcaccctggagcctcaatggtcatcaatgaggatggtagccgcacagctctcagc
gccactgacgtgacccagagggaagctgtggccaagcagctcctcacccctgccactggc
gcccccaagccccaaggagcaaaagttgtgtgtcgtcacgtgaagaacggggacgttctc
ctgctgaaccggcagcccaccctgcacagaccctccatccaggcccaccgagccagaatc
ctgccttcggagaaagtcctgcgcctccactatgccaactgcaaggcatacaacgccgac
ttcgatggagacgagatgaacgcccatttcccccagagcgagctcggccgggccgaggcc
tgcgtcctggcctgtaccgatgagcagtacctggtgcccaaggatggccaaccgttggct
ggattgatccaggatcacatggtctctggtgccaggatgaccacccggggctgcttcttc
acccgggagcagtacatggagcttgtgtaccgaggactgacagacagagttggacgagtg
aagatctttcctcctgccattctcaagccctgcccactgtggacaggaaagcaggttgtc
tccacgttgctgataaacataatcccagagaaccacatccccttgaatttgattgggaag
gcaaaaatcagcgggaaagcctggatcaagcagagcgcccgagctgcaccagcgtgtggc
ctggatgctatgtgcgagtcccaggtcatcatcagagaaggggagctgctctgtggggtc
ttggacaaggcccactatggcagctctgcctacggcctggtccactgctgttatgaagtc
tatggcggggagacaagcggccaagtgctcacgtgcctggctcgcctcttcacggcctac
ctgcagctctacaagggcttcaccctgggtgtggaagacattctggtcagacccctggca
gatgccaagaggcaggcggtcatagaagaatcctctcactgcggctcccgggccgtcagg
gccgcctttaatctccctgacctggcgtcatgcgaggacgtgcaaaccaagtggcaggat
gcccatctcaacaaagaccagagggactttaacatggtcgatctcaagttcaaggaggaa
gtgaatcattacagcaatgagattaacaaggcatgcatgcccttcggactccacagaggg
ttcccagagaacaacctgcagatgatggtacaatccggagccaaaggatcgaccgtcaac
acgatgcagatttcctgtctgctcggtcagattgagctggaagggagaaggcccccactg
atgccatctgggaagtcactgccctgcttccaaccttacgaagtcactcctcggtctgga
ggcttcgtcactggcagattcctcacaggcatcaggcctcccgaattcttctttcactgc
atggcagggagagaaggtctggtagatacagctgtcaaaacaagtcgatcaggatacctg
cagaggtgcatcatcaaacacctggaagggctagtggttcagtatgatctcaccgtgcgc
gacagcgacggcagcgtggtccagttcctgtacggagaggatgggctggatatccccaag
acgcagttcctgcagcccaagcagtttcctttcctcctcagcaactacgaggcaatacgg
aaatcaaagcatctggatgaagttttgtccaggatggaccccacgcaggcccagcagcac
ttcagagccctcaggaagtggcgggccaggcatcctcccacctgccccagacacggggcc
tttctgagctattcccagaaagtacaggcggccgtccgctccctgaacctccctgggggg
agccaaaatggccgggaccccagtgcgcaggagattttaaaaatgtggtctgagttagat
gagaagagccggaggaagtatgtgaagagagccctcccctgccctgatcccagcctgggc
gtctggcgtccagatatccactttgcatctgtgtcagaaacatttgaaaaccaagttgac
gcatatgcccaggagtgggcggctcaggctgagagaagctatgaaaaatcagagctttct
cttgatagattgaagaccttgctccatctgaagtggcaacgggcactgtgtgacccgggg
gaagcagtgggcctcctggccgcccagagcatcggagaaccgtccacacagatgaccctg
aacactttccactttgcgggcagaggagagatgaatgtcacactgggaattccgagattg
agggagatcctcatggtggccagctcgaacatcaagacgcccatgatgagtgtgcctgtg
ctcaacaccaagagggccttgaagagggtcaggagcctgaagaagcagctgacccgcgtg
tgcttaggcgaggtattgcagaaagttgatgtccaggagtctttctgcatggaagaaaaa
aaggacaaataccgagtttactgcattcgctttaatttcctcccctacaagtattaccag
caggagaagtacctgcgacctgaggatattctgcattttgtagaagcaaggttcattaag
ctcctgctggaggccatcaaaaggaagagcagcaagacatcgtcctttaaagccgtgagc
actcggagggcaactcagcaggacctggacggcggtggggagatgccgggaagtcgggag
gatcgggagggtgacgacgaaggggaggagcagatcgtcgatggcgacgctgaagaagga
gatgctgatgctacagacaagaagtggaaaaagaagcaggaggaagaggtggattatgag
agtgaggaagaggagcaggaagaagagaatgaggaggagaatgagcgagaggaggagggc
agccagggcccagacactgagcagccagcgccttcctcactggcgcccagcaagaagcgg
gcacacaggcacgggccctccggggcagaagcggagctgagggtccaggctgtacggaac
atccactcgtccatccaggattacacgttcgatgtggagaagggcctgtggtgtgaggtg
acgctgaagctgccgctgatgaaggtgcactttgacctgtgctcgctggtggtctccttg
gcccacagtgctgtcgtctacgagaccaagggaatcacccgctgcctcctcaatgacacc
accaacaaaaagcaggagaaggagcttgtcctgaacacggagggcatcaacctgccggag
ctgttcaagtatacagatgtcttggacctcagccgcctctattccaatgatattcatgcc
atggctaacacgtatggcattgaggccgccctgcgggtgattgagaaggagatcaaagac
gtgtttgctgtgtatggcattgccgtggatccccggcacctctccctggtggccgactac
atgtgctttgagggcgtttacaaacctctgaaccggtttgggattcagtccaactcctcc
cctctgcagcagatgacatttgagaccagcttcaagttcctgaaggaggcgaccatgatg
ggtgcccatgatgagctgagatccccgtcagcctgcctggtggtcgggaaggttgtcaag
ggaggaacgggcctgtttgacctcaaacagccactgagatag
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integrated database retrieval system
