Phascolarctos cinereus (koala): 110197222
Help
Entry
110197222 CDS
T05867
Symbol
COL4A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04151
PI3K-Akt signaling pathway
pcw04510
Focal adhesion
pcw04512
ECM-receptor interaction
pcw04820
Cytoskeleton in muscle cells
pcw04926
Relaxin signaling pathway
pcw04933
AGE-RAGE signaling pathway in diabetic complications
pcw04974
Protein digestion and absorption
pcw05146
Amoebiasis
pcw05165
Human papillomavirus infection
pcw05200
Pathways in cancer
pcw05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110197222 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110197222 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110197222 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110197222 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
110197222 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
110197222 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110197222 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
110197222 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110197222 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
110197222 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
110197222 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcw04147
]
110197222 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110197222 (COL4A3)
Exosome [BR:
pcw04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110197222 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110197222 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110197222
NCBI-ProteinID:
XP_020826600
UniProt:
A0A6P5IWW9
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MSPGGASRRVLPMLLPTRLLLLLLIVAAPAVGKGCVCTAKGPCSCDGIKGNKGEKGFPGC
PGTPGQKGLPGPEGIPGPQGPKGSPGFPGFIGSKGTRGMTGLPGFPGPPGLPGSPGNTGP
YGPPGLPGCNGTKGEQGFPGPPGTPGQPGLPGTNGLKGEKGAPAREKGTGNGGRGDPGLP
GIPGRQGLPGPPGFPGPAGPQGPPGFLGFPGEMGPPGPKGHMGVKGIGEKGDQGLRGLTG
PPGPPGAVIVTLTGPDNLTDSKGDKGDKGSVGEPGPPGPKGLPGESYASEKGIPGDPGPQ
GQPGKDGAPGFPGLPGAKGKKGLPGLTGETGVKGFKGDIGPPGFRGPTEYYSGYLEKGND
GAPGPPGPKGERGPRGPRGPPGDIGRPGASRPGLRGTPGFPGIKGHKGERGPPGINIMGP
PGLPGFPGTPGYKGLPGLPGPPGKVTFQNGPPGDHGDPGHVGSPGMPGAYGPKGEEGLLC
TQCTYTPGPPGLPGLPGLDGEKGTQGGQGPDGLKGSPGSPGYTGLPGFPGFPGTPGDQGQ
KGEKGETSHEGEAGDRGDPGNRGDPGKKGSDGIPGKPGTKGLPGTKGEPAVNGEKGDKGF
PGNPGDPGHPGPMGPAGASNYGPPGKPGPKGATGVPGFPGLPGNDGPKGEPGIAEPVPGP
PGPPGLPGLPGLQGTTGKPGSMGPSGNPGPPGSDGEAGFPGIGVPGPPGQRGDRGFPGAK
GSPGCPGEMGEPGSPGIPGLPGAKGDPGTAIPGKPGITGFQGEKGSSGENGEHGLPGLPG
LPGSPGNDGPNGLPGEPGFPGPPGYNGIPGICIPGAKGTQGLPGLNGLRGPQGDRGLDGP
KGDPGIPGLDRSGSPGEPGPPGLPGHQGDKGLVGPTGHPGAPGHPGPPGQKGEVGMMGFP
GTTGPPGMPGNPGAPGYKGSFGIPGRKGKKGLPGAKGERGNKGNQGPSMISADIGEKGEP
GPGGPLGGLGQKGERGTPGLPGLQGHDGMPGRPGLPGLRGDPGTIGHPGEPGPPGGPGSM
GHMGMPGPKGKKGTAGHPGVTGRPGLPGIQGMKGEKGEPGYAKDAQPGPPGPTGEPGPPG
SLGMKGGRGPPGPPGPVGPAGTEGNQGRSGNRGPPGQPGPTGDLGFKGCKGFPGTPGMKG
PPGPPGAPGPPGPMGEKGKQGGDAFPGPSGEKGELGLLGALPGPRGLPGLQGDKGNEGRP
GLPGIYGIKGVMGDVGPIGPIGMTGPPGPPGFPGALIPGQKGNQGPPGLGGNPGDPGPPG
PPCEYTSGIKGEKGFPGDPGPTGPAGTIGDPGPPGHLGMPGTPGFPGFGGDPGFQGFPGM
TGEKGNLGPPGPFGPPGSIGPKGPPGQPGDPGTIKIISLPGSPGPPGQPGDPGMQGEPGP
QGPAGYPGLQGPRGQPGKPGKPGIPGPVGEKGNKGSKGEIGPPGSVGLPGLKGKPGNFGP
PATGSSIRGFIFTRHSQSTEIPSCPRGTVPLYQGYSLLYVQGNEQAYGQDLGTLGSCLQR
FTTMPFLFCNTNDVCNFASRNDYSYWLSTTAQMPMNMAPITGRAVEPYISRCTVCEGPAM
AIAVHSQTTDIPLCPDGWISLWKGFSFVMYTSAGSEGSGQALASPGSCLEDFRANPFIEC
HGRGTCNYYSNSYSFWLASLNPRRMFRKPTPSTVKAGELEXIISRCQVCMKRRD
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccgggggcgcgtccagaagggtgctgccaatgttgctgccgactagactgctg
ttgctgctactcattgtggcggctcccgctgtgggcaagggctgcgtctgtacggccaag
ggcccatgctcctgtgatggcatcaaaggcaataagggtgagaaaggctttcccggttgc
cctggtactcccggccagaaaggactgcctggtccagaaggtatacctggaccccaggga
cccaagggttctccagggtttccaggctttattggttccaaaggcacaaggggaatgaca
ggattgccaggttttccaggtcctccaggacttcctggtagtcctgggaatactggtccc
tatggacctcctggcttaccaggatgcaatggcacaaagggtgagcaaggatttccagga
cctccagggacaccaggtcagccagggttaccgggcaccaatggattaaaaggagaaaaa
ggagccccggcccgtgaaaaaggtacaggaaatggtggaagaggtgatcctgggttacca
ggaatcccaggacgtcagggtttgcctggccccccgggatttcctgggccagctggacca
caagggcccccaggattcttaggttttccaggagagatgggacctccaggaccaaagggt
cacatgggtgttaaagggattggagaaaagggagatcagggtttgagagggttaacagga
ccccctggaccaccaggagcagttattgtgacactgactggaccagacaacctaacggac
tctaaaggggataaaggagacaaaggatctgtgggtgagccaggacccccaggaccaaag
gggttacctggagaatcttatgcatctgaaaaaggcattcctggagaccctggtcctcag
ggacagcctgggaaagatggtgcccctggtttccccggccttcctggagctaagggtaaa
aagggtttgcctggattaactggcgaaactggcgttaagggatttaaaggagacattggc
ccaccaggattccgtggtccaacagaatactacagtggatacctggagaaaggcaatgat
ggcgctcctggccctccaggacccaaaggagaacgtggtccacgtggacccagaggtcca
ccaggagatattggtagacctggggcatcaagacctggtcttaggggtactccaggattt
ccaggaatcaaaggacataaaggagagagaggaccacctggcataaacataatggggcct
cccggacttcctggattcccaggcacaccaggctacaaggggttacctggtcttccagga
ccaccaggtaaagtaacttttcagaatggtcctccaggagaccatggagatccaggccac
gtggggtctccaggcatgcctggagcctatgggcccaaaggagaagaaggactgctgtgt
acccagtgcacttatactccaggacccccaggtctgccaggtttgcctgggttagatggt
gaaaaaggaactcaaggggggcaaggtcctgatggtttaaagggaagcccaggatctccg
ggatatacaggtctaccaggctttccaggtttcccaggtactcctggtgatcagggacaa
aagggagaaaaaggtgaaacatcacatgaaggagaagcaggagatcgaggggatccgggg
aacagaggagaccctggaaaaaagggctcagatggaattcctggaaaacctggcacaaaa
ggattaccaggaacaaaaggcgaaccggctgtgaatggtgaaaagggggataaaggtttt
ccaggaaatcctggtgaccctgggcacccaggacccatgggaccagctggagcatccaac
tatggaccaccaggaaaacctggaccaaagggagctacaggcgtgcctggatttcctgga
ttacctggaaatgacggtcctaaaggagaacctggtatagcagaaccagtacctggccct
ccaggacctcccgggttaccagggctacctggcctccaaggcacaactggaaaaccaggg
tccatgggaccgagtggtaacccaggtcctcctgggtctgatggtgaagcaggattccca
ggaattggagttcctgggcctcctggacaaagaggagacagaggttttccaggagccaaa
ggatcaccaggttgtccaggagaaatgggggaacctgggtcacctggaataccggggctc
ccaggagcaaagggagacccaggtacagcgattcctggaaaaccaggaatcactggtttt
caaggagaaaaaggaagttcaggggaaaatggagaacatgggctccctggacttccaggc
cttccaggatccccgggaaatgacggacctaatgggctaccaggagagcctggatttcct
ggaccgccaggatataatgggattccggggatctgcataccgggtgcaaagggaacccag
ggacttccaggtttaaatggactaaggggaccacaaggagacagaggcttggatggtcct
aaaggagacccagggataccaggcttagacaggtcaggatccccaggagaacctgggcca
ccaggactgccaggtcatcaaggagataaaggactagtaggtccaacaggacatccagga
gctccaggacatccaggtccaccaggccaaaagggagaagttggtatgatgggttttcct
ggaacaactgggcctcctgggatgcctgggaatccaggcgccccaggatacaagggtagc
tttggaattccaggaagaaaggggaagaaaggacttcctggagcaaaaggggaaagggga
aataaaggaaaccaaggaccatcaatgatatcggctgacataggagagaaaggtgaacca
ggaccaggaggacctttgggaggccttggacaaaaaggagagagaggtactccaggtcta
ccaggactacaaggccatgatggaatgcctggaagaccagggctaccaggactcagagga
gaccctggcaccataggtcaccctggagaaccaggaccacctggaggacctggaagcatg
gggcacatgggaatgccaggcccaaaagggaaaaaaggaactgcaggccacccaggtgta
actggccgaccaggcctccctggaattcagggcatgaagggagagaaaggagaaccaggc
tacgcaaaggatgcacagccaggacctccagggccaacgggagaaccaggacccccaggc
tccctaggcatgaaaggaggaagaggcccaccaggcccaccaggcccagtaggacctgct
ggaactgaaggaaaccagggacgttctggaaaccgtggccctccaggacagcctggccct
actggtgatttgggatttaaaggatgcaaaggtttccctggtactccaggaatgaaagga
cctccaggccctccaggagccccaggacctcctggaccaatgggtgaaaaaggaaaacaa
ggtggggatgcatttcctggcccatcaggagaaaaaggagaactaggtctgctaggggca
cttccaggtccaagaggtcttcctggtttacaaggagacaaaggaaatgaaggaaggcca
gggttacctggcatctatggtataaaaggtgtgatgggagatgtgggaccaataggcccc
attggcatgactggaccaccagggccaccaggttttcctggtgcactaattccaggccaa
aaaggaaatcaaggtcctccaggcttgggaggaaatccaggtgatcctggccccccaggc
ccaccttgtgaatacacatcaggaataaaaggagaaaaaggtttcccaggagaccctggg
cccacaggtccagcaggaaccataggagaccctgggcctcccgggcatctgggaatgcca
ggtaccccaggttttccaggttttggaggggatcctggatttcaaggatttcctggcatg
acaggagaaaagggcaacctaggacctccaggaccatttgggcctcctgggtcaattggg
ccaaaaggacctcctggtcaacctggagaccctggaacaattaaaattatatccctgcca
gggagcccagggcctcctggtcaacctggagacccaggaatgcagggagaaccaggacca
caaggaccagcaggatacccaggactgcaaggaccaagaggtcaaccagggaaaccagga
aaaccaggaattcctggcccagttggagaaaaaggcaacaaaggctctaaaggagaaatt
ggaccacctggatcagttggattgcctggattaaaaggaaaacctggaaactttggacca
cctgcaactgggtcatctatcagaggctttatcttcacccgtcacagtcaatcaacagag
attccttcatgccccagaggaacggtgcccctttatcagggctattctcttctctatgta
cagggaaatgaacaagcctacggacaagaccttggaactctcggtagctgcctacaacgt
tttaccacaatgccattcttgttctgtaataccaatgatgtgtgcaattttgcttcccga
aatgactactcgtactggctgtcaacaacagcacagatgccgatgaacatggccccaatt
actggcagagctgtggagccttatattagcagatgtacagtctgtgaaggtcctgccatg
gccatagcagttcacagtcagaccactgacatccctttatgtcctgatggctggatttct
ctttggaaaggattttcttttgtcatgtatacaagtgcgggctcagaaggctctgggcaa
gcactagcatcccctggctcctgcctcgaagacttccgcgccaatccatttatagaatgt
cacggcaggggaacctgcaactactattcgaattcttatagtttctggttggcttcatta
aatccaaggagaatgttcagaaaaccaactccatccactgtgaaagccggagagctagag
nagataatcagtcgctgtcaggtttgcatgaagagaagagactga
DBGET
integrated database retrieval system
