Phascolarctos cinereus (koala): 110198838
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Entry
110198838 CDS
T05867
Symbol
USP40
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 40
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcw01002
]
110198838 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110198838 (USP40)
Enzymes [BR:
pcw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110198838 (USP40)
Peptidases and inhibitors [BR:
pcw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110198838 (USP40)
Ubiquitin system [BR:
pcw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110198838 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110198838
NCBI-ProteinID:
XP_020829013
UniProt:
A0A6P5J6L6
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MFGDLFEEDFPYIPENHLEKGRKSKWAEPEPPPPRGITNLSGIQNQAGTCYLNSLLQTLH
FTPEFREALFALDPEELGSLEDKDDPNAKVRVIPLQLQRLFAQLLLSDRQAASTTDLTDS
FGWNNSEEMRQHDVQELNRILFSALESSLVGTSGHDLINRLYHGTIVNHITCKECENISE
RQEDFLDLTVAVKNLSGLEEALWSMYVEEEFFDAENLYHCGTCNKLVSATKSARLRKLPP
FLTISLLRFNFDFAKCERYKETGCYTFPLQMDLKPFCEQTELDDSEYVYDLFSVIIHKGG
CYGGHYHVYIKDVDQLGNWQFEEDESESIAKAKSLKDLPHVQETDNPLTVLKNILSQEEN
KLIPVDQLGQKLLASIEISWNKKYRKQHGPLLKFLHAHSDVFLLSSNPSKVCLRRDASPP
QPPLAEHEQPGLEAPSYGKGPAASGTEPAGGLWPEVSPEGPHWFDINDSQVEPIWEADIE
KQFQGKESAYMLFYRKTQLQRPREAQSNPQYKVPGHLLREVREANRELQKKRADYDSVVN
TLDLHLHLGPCYEFYDGALHPSSSVTEDCMLDLTIDKRKTVGDLRQLVFQLLEFWEGDLV
LSLAKLVPAGLHVCQALEGDELTLHEIEMTDGEDIFVWNGIEVGGVRIPVGEDALPILLN
ILQLTSSSDGEKGQPFVELHHVFPSNAEVGSIFTALASPVGILLVNITGSHILELENWSV
IPRENFGKTFREQGLQDGSSVWILSSSSYDQSLLLAGGRRESSLSNFSWMQVKNLCQADS
EEELVKVSATVETMLLDIRIKAIKELGLQEELVNNSCLRLIDRNGQLLSPAPEHYTVAEA
EMXMGSLLGLCRGRAPTSSQLFLFFTVGSDFESGLTMEIIVESTISVSECLKKMLEKAGL
QGDVWHLRKADWCFEAGEPLNEEHASLSELMISSGDTLVLSEGKLPPKGFLKVPVWWFHP
SVPSGRQDDPQDHVGHITHQVEALRTTPEGGDLHRDVPDIQSEVPFTFVGDVEISEEASV
ADLKSQAMSLPSLLDFGFPSADFLRAWTMESKRPGRLLRNNQQQLKEYKVGGRTQICIEP
LQKRETLGSKDMLLRTQMGIPGERAYYPTVDFVWDILNDCTAASLRQGVAAHYCLPVDGI
EIAKYFPEKFEWIPISSWDQQVSKRKKKKKQENLQMAPYYLKDGDIIGVKNLLVDGNRDF
STPRDDVGREKQTRLFGGKRRRRQAVQLQRSETEVEAHMPEKPHRPEAGLSINVGVFR
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggacctgtttgaagaggactttccctacatcccagagaatcacctcgagaaa
ggaaggaaatccaagtgggcagagcctgagccgccgcccccccggggcatcaccaacctg
agtggcatccagaaccaggccgggacatgctacctcaactcattgctgcagactctccat
ttcaccccagaattccgagaagctttgtttgctctggacccagaagagctcggatcctta
gaggacaaggatgaccccaatgcgaaggtgcgggtcatccctctgcagttacaacggttg
tttgctcagctcctcctctcagaccggcaggcggcatccaccacggacctcaccgacagc
tttggctggaacaacagcgaggagatgaggcagcacgatgtccaggagctgaaccggatt
ctcttcagcgcgctggaaagctccctggtgggcacctctggccatgacctcattaaccgc
ctctaccacggcaccattgtgaaccacatcacgtgcaaggagtgtgagaacatcagtgag
cgacaggaggatttcttggacttgacagtggccgtcaaaaacctgtccggccttgaggaa
gctctttggagcatgtatgtggaagaggaattcttcgatgcggagaacctgtatcactgt
ggaacgtgcaacaagctcgtcagcgccaccaagtcggcccggctgcggaagctgcctcct
tttctgacgatttcgttgctgaggtttaattttgattttgccaaatgtgagcgctacaag
gagacaggctgctacacattccctctgcagatggacctgaagcccttctgtgagcagacc
gagttggatgactcagagtatgtgtacgacctcttctctgttattatacacaaaggcggc
tgctatggaggacattaccacgtgtatattaaagatgtggaccagttgggaaactggcag
tttgaggaagacgagtctgagtcaattgcaaaggccaagagtttgaaggaccttccacat
gttcaagaaactgacaatccgttgacagtcctcaaaaatatcttgtcccaggaggaaaat
aagctgattcctgtggaccagctgggtcagaagctcttggctagcatagaaatatcctgg
aacaagaagtataggaagcagcatggtcccctcctgaagtttttgcacgcccattctgat
gtgtttctgctcagctccaatcccagcaaggtctgtctcaggagggatgccagccctccc
cagccgcccttggctgagcatgagcagcctggcctcgaggccccttcctacggcaagggc
cctgcagcttctggaacagagcctgctgggggtctgtggccagaggtcagccctgaaggc
cctcattggtttgacataaatgattctcaagtggaacccatctgggaagcagacattgag
aagcaattccagggaaaagagagtgcctacatgttgttttaccgaaagacgcagctgcag
aggcctcgagaagctcagtccaacccgcagtacaaggttccaggtcacttgctgagggag
gtgcgtgaggccaacagggagctgcagaagaagagggcagactatgactctgtggtcaac
actctagacctacatctccacctgggcccttgctacgagttttatgatggtgccctgcac
ccctcttcttccgtaacagaagattgcatgttggacttgaccattgataaacggaaaact
gtaggtgatcttcggcagttggtatttcagctcctggaattctgggaaggggatctggtg
ctcagccttgccaagcttgtgcctgcgggactccatgtttgccaggccctcgaaggagat
gaactgacattgcatgaaattgaaatgaccgatggggaagacatctttgtgtggaatggg
atagaggttggtggggtcaggattccagttggtgaggacgctcttcccatccttttgaat
atccttcagctgacaagtagcagtgacggagaaaaggggcagccatttgtagaactccac
catgtgtttccctcaaatgctgaagttggctccatattcacagccttagcatcccctgtt
ggcatcctcctggtgaacattacaggctctcacattctcgagttagagaactggtcagtc
attcccagggagaactttggaaagacattcagagagcagggccttcaagatggcagctcc
gtgtggatattaagctccagcagctatgaccaaagcttgctattggccggaggcagaagg
gagagttctctgagcaacttcagctggatgcaggttaagaatctgtgtcaagcagattct
gaggaggagctggtgaaagtttcggcgactgttgaaacaatgctgttggacattcgaatc
aaagctatcaaggagctggggttgcaggaggagctggttaataacagctgcctgaggctg
attgatcgaaatgggcagctgctttctccagcgccggagcattacactgtggccgaagca
gagatgngaatgggcagtttgttgggactgtgtcgtggcagagctccgacctcctcccag
ctcttcctgtttttcaccgtgggcagtgacttcgagtccggcctgacgatggagatcatt
gtggagtcgacgatctctgtgagcgaatgtttgaagaagatgctggagaaagctggtctg
caaggtgacgtgtggcatttgcgcaaagcggattggtgctttgaagctggagaaccttta
aatgaggaacatgcttccctgagcgagcttatgatcagcagtggggataccttggtctta
tctgaagggaagcttccacccaagggtttcctaaaagtgcctgtctggtggttccatcca
tcagtgccctctggacggcaagacgaccctcaggaccacgtgggccacatcacccaccag
gtggaggctttgagaaccacccctgaaggaggtgatctgcacagagatgttccagacatc
cagtccgaagtgcccttcacttttgtgggggacgtggagatctccgaagaggcgtccgtg
gcggatctcaagagtcaggccatgagcttgccgtctctcctggactttggtttcccgtct
gctgacttcctcagagcctggaccatggaaagtaagcgtccaggcaggcttttacgaaac
aaccagcaacaactcaaggagtataaagtgggagggagaactcagatatgcatagagcct
cttcagaaacgagagaccttgggctccaaggacatgctgctgcggacccagatgggcatc
cctggggagagggcctactaccccactgtagactttgtgtgggacatcctgaacgactgc
acggcggcatccctgcggcagggtgtggctgcccactactgcctccctgtggatggcatt
gagattgccaagtactttcctgagaagtttgagtggatacccatctctagctgggaccag
caggtttccaagaggaaaaagaagaaaaagcaggagaatttgcagatggcaccttattac
ctgaaagatggagatattattggtgtgaagaacctcctggtggatggcaaccgagacttc
agtaccccgagagatgatgtgggcagagagaagcagaccaggctgtttgggggaaagagg
agaaggcgccaagctgtccagctgcagagaagtgaaactgaggtagaagcacatatgcct
gagaagccgcacagaccagaagcggggctttccatcaacgtgggcgttttcagatag
DBGET
integrated database retrieval system
