Phascolarctos cinereus (koala): 110211050
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Entry
110211050 CDS
T05867
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03015
mRNA surveillance pathway
pcw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110211050 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110211050 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110211050 (CPSF6)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110211050 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
110211050
NCBI-ProteinID:
XP_020845886
UniProt:
A0A6P5KNB4
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Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDALPPSV
GDDVGKGSAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDAARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggatcacatagatatttacgcggatgtgggcgaggagttcaaccag
gaagctgaatatggtgggcatgatcaaatagatttgtatgatgatgtcatctctccatct
gcaaataatggagatgccccagaggatcgcgattacatggatgctctcccaccatctgtt
ggcgatgatgtaggtaaaggatcagcaccaaatgttgtctatacctatactggaaaaaga
attgcattgtacattggaaatcttacatggtggacaactgatgaagatttaactgaagca
gttcattctttgggagtaaatgatattttggagattaagttttttgaaaaccgtgctaat
ggccagtcaaagggatttgcccttgttggtgtaggatctgaagcatcctcaaaaaagtta
atggatctgttgcctaaaagagaactacatggtcagaatcctgttgtgactccttgtaat
aagcagttcctgagtcaatttgaaatgcaatccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggccctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttccaggtggggacagatttcctggacca
gctggaccaggagggccacccccacctttcccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacaaactccaccacgtccacccctaggtcct
ccaggccctcctggcccaccaggccctccacctcctggtcaggttcttcctcctccatta
gctgggcctcctaatcgaggtgatcgccctccaccaccagttctttttccaggacagcct
tttgggcagcctccactgggtccacttcctcctggtcctccacctccagtgccaggctat
ggcccccctcctggtcctccacctccacagcagggaccacctccgcctccaggccctttt
ccacctcgcccacctggccctctggggccacccctcacacttgctcctcctccacatctt
cctggaccacctccaggtgcccccccaccggctccacacgtgaatccagctttctttccc
ccaccaaccaacagtggcatgccaacatcagacagccggggtccaccacccaccgacccc
tatggccgaccaccaccatatgatagaggtgactatgggccccctggaagagaaatggat
gctgcaagaacgccattaagtgaagcagagtttgaagaaatcatgaatagaaacagggcg
atttcgagcagtgccatttcaagagctgtgtctgatgccagtgctggtgattatgggagt
gctattgagacattggtaactgctatttccttaattaaacaatccaaagtatctgctgat
gatcgttgcaaagtgcttattagttccttgcaggattgccttcatggaattgagtccaaa
tcttatggttctggatcaagaagacgtgaacgatcgagagagagggaccacagtagatcc
agagaaaagagcagacgtcacaaatcccgtagtagagatcgtcatgatgattattataga
gagaggagcagagaacgagaaagacatcgggatcgtgaccgagaccgtgatagagaacgt
gatagagagcgagagtatcgccaccgttaa
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