Phascolarctos cinereus (koala): 110216825
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Entry
110216825 CDS
T05867
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110216825 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110216825 (COL23A1)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110216825 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110216825
NCBI-ProteinID:
XP_020854484
UniProt:
A0A6P5LCM8
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MGAWEPGARRGSPAGTPACPAWGGGAAALALSALCLLLSLGSVAACLLLSAQASELQGRV
SALEEEQQRQRLAGWGPPEAPGALISWAEPHLERLLTEKLEGLAKHRKTREVLPECLCPP
GPPGRRGKPGRRGDTGPAGQAGRDGYPGPLGLDGKPGLPGPKGEKGEPGDFGPRGDRGQD
GAAGPPGPPGPPGARGPPGDTGKDGPRGLQGPDGLKGEPGPGGVMGPKGPPGLKGEPGMP
GRKGDDGQPGQPGLQGSIGPKGEEGSPGPQGQNGTDGSPGAKGEPGERGSDGFLGPRGLP
GLKGEQGDTVVIDYDGKILDALKGPPGPQGPPGPPGTPGAKGELGLPGPPGVDGEKGPKG
SKGDQGQPGLMGPKGEIGEMGLSGPPGVDGPKGEKGESGSASLQESLAQILAEPGPPGLP
GPPGPMGLQGIQGPKGLDGAKGEKGATGEKGSNGLLGPAGPPGLIGLPGTKGEKGRPGEP
GLDGFPGPRGEKGERSKQGEKGDRGVPGRKGAKGQKGEPGPPGLDQPCPVGADGLPVAGC
WHK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgtgggagccgggcgcccggagaggcagccccgcggggactcccgcgtgtccc
gcgtggggtggtggcgcagcggcgctggcgctgagcgcgctctgcctacttctgtccttg
ggctcggtggctgcttgcctgctgctgagcgcccaggcgtccgaactgcagggcagggtg
tccgcgctcgaagaggagcagcagcggcagcggcttgccggctgggggccccccgaggcg
cccggcgcgctcatctcctgggccgagccccacctggagcggctcctgacggagaagttg
gaaggactggccaagcaccggaaaacccgagaagtcttacctgagtgtctctgccccccg
ggacccccagggaggcgtggaaaacctggaagaagaggagatactgggcctgcagggcaa
gcaggacgagacggttatccggggccactgggattggatggtaagccgggattgccggga
cctaaaggtgaaaagggagagccaggagactttggcccacggggagatcgaggtcaagat
ggagctgctggtccacctgggcccccaggtccccctggagccagagggcccccaggagat
acaggaaaagatggccctcgaggactgcaaggccctgatggtctaaaaggagagccagga
ccaggaggtgtgatgggcccaaaaggacctccaggactcaagggtgaacctggcatgcca
ggaagaaagggagatgatggacagccaggacaaccaggactccagggatccattgggcca
aagggagaggaagggagtccagggcctcaaggacagaatggaactgatggatcaccagga
gccaagggggagcctggtgaaagaggatctgatggcttccttgggcccaggggtctacct
ggcctgaaaggtgagcaaggagacacagtagtgattgactatgatggcaaaatcctggat
gctctgaagggtcctccaggtcctcaaggcccacctggtcctccaggaacccctggagca
aagggagagcttggattgcctggtcctcctggagttgatggagaaaagggaccaaagggc
tcgaaaggagaccagggacagccaggactgatgggacccaaaggagaaattggagaaatg
ggcttgtctggccccccgggtgttgatggccccaaaggcgaaaagggagaatcagggtct
gcaagtcttcaggagagcctggcccagattctagcagaaccagggccacctggcttacct
ggccccccaggtcctatgggtcttcagggaatccagggtcctaagggcttggatggtgcg
aaaggggagaagggtgccaccggagagaaaggctccaacgggctgcttggaccagctggc
ccacctggcctaattggattacccggaacaaaaggagagaagggcagacctggtgagcca
ggattggatggtttcccaggaccccgaggagagaagggagagaggagcaaacaaggagag
aagggggatcgaggggttcctggcagaaaaggagcaaagggacagaaaggagagcctgga
ccccctggattggatcagccatgtccagtgggggctgatggactgcctgtggcaggctgc
tggcacaagtga
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