Phascolarctos cinereus (koala): 110217028
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Entry
110217028 CDS
T05867
Symbol
COL7A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110217028 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
Interfer-bind
DUF4992
Glyco_hydro_36C
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
110217028
NCBI-ProteinID:
XP_020854817
UniProt:
A0A6P5LA59
LinkDB
All DBs
Position
Unknown
AA seq
2935 aa
AA seq
DB search
MDSSRMKPWFLLTVLIGVLLVSVKGQGERGRGLGGVICTNLYAADIVFLLDGSSSIGRNN
FREVRAFMEGLVLPFTEVVGPSGVRFSVVQYSDDPRTEFGLDSYGSGNEVIQAVRELTYK
GGNTRTGAGFRHVADHIFLPQLARPVPKVCILITDGKSQDQVEPAAQRLKGQGVKVFAVG
IKNADQGELRRAASEPPDVFFYFVNDFSILSTLLPLVSRRVCTTTGGTPQILPPEGLPSG
PRDLVLSQASSESLLAEWTAASGPVVSYKVQYVPLTGLGQPVPDQRQEVTVPARETRVRL
QGLRPQTEYQVTVVAQYANSVGEAVSGTAQTAALEGPVISIQNATAHTILVAWRPVAEAT
GYRVTWRNLESGSSQQLDIGRGQSSALLKGLSPDTEYVVTVTPIHGRMPGPSSSLKTRTA
LGIIQNLQTVILGPTSIQVFWTHIPEAQGYRLEWRRVSGSEPTQSVVLSTDVTSYQLQGL
QPGTEYRLTLYTLYEGREVATPATISQTVLEPALGRVSDLRVAETSPSRRVVRVVWSSVP
GASGYRFVVRSTQDGSEKTQRLPADQTSFELDRVQPGVSYVVRVSALAGSREGPAGTLTV
RLDPESLPRVPRLRVVASEPGRVQVSWGAVPGVSGYRLSWRLRDGQESSRTLPADTTSFD
IGGLRPGATYQVSVSALRGADRGPPSVITLLTDSPGSVAGLRVTHAGSSSVRITWTGVPG
ATSYRISWHSGRGPEQSQLVPGEASTAKLDGLEPNTDYTVRVTALVGSLEGAAASVAVRT
APEPVGAVSRLQILDSSSDVVRVTWVGVPGATSYRLVWGRRDGGPESSRMLPGDTDSAEI
GGLEGGISYTVRVTALIGNREGAPVSLIVTTPPVAPAAPGSLRLLQSEERALRLAWDPVP
GAGGFRLRWRPEGGPEQSRVLGPEVSRYDLLGLEPGTLYYVTLSTLGPSGSGESPPRTLS
ARTGVPSLLTTDLRVVETSVDSVTLAWTQVPGTSSYILSWRPLPGSGYTGPGSQQTLPGS
LSSQRVSGLEPGVSYTFSLTPVQGSSRGPEVSLTQHPGCANGQADVVFLIHATRDNEHRS
GIVKSALSRLVSALGPLGPDAMQVGLMTYSHRPSPLVPLNGSYDRNAILQRIQDIPYTDP
SGNNLGVAINTAHRYLLAPGSSGRRSRVPGLLVLVADGPSGDDVISPAREAQAAGISVFA
LGIPGAQPEQLRRLVSGTEPAPVFIAVDNARGLEQAVGGLATALCQVASGTQLRPVPCPA
QCPRGQKGEPGQTGQKGQIGPPGEPGRSGPPGPRGLPGGGEKGERGFPGVDGQPGSPGNP
GSPGLTGSPGRPGPRGEAGEPGLPGQKGEPGRPGSVIGGGAGQPGRKGEPGVQGPPGLRG
SDGNPGLPGPRGASIKGDKGERGEPGLPGAGQGAGGGDPGLPGLPGNPGPVGPRGPPGEK
GDKGAGEDGFPGLPGRPGNPGDRGPRGPPGEPGSKGDPGQPGSSGEVGEKGDRGPPGPPG
LQGEPGLSGRPGAEGQEGPPGSAGRRGEKGEPGEPGKPGEIVGFDTAGVKGEKGNLGPEG
PRGAPGPKGDRGSPGVGIPGDPGPKGELGERGAIGLTGRAGPKGDVGASGEKGEPGRAGS
PGPIGPRGRDGEPGEKGDEGPMGETGLPGKPGDRGLRGLPGTRGTPGEKGDQGDPGEDGR
NGSPGPMGFKGERGEPGPPGPPGRLADPGTGIPGVGEKGIKGEPGDPGEDGPRGPKGDAG
LPGAPGERGAEGLRGPPGARGDSGDRGPAGEKGERGTPGSDGRNGLDGKPGAIGPPGLRG
DSGKTGEPGRDGLPGLRGEQGPPGPPGLPGVTGKPGDDGKPGLNGKNGEPGDPGEDGRKG
DKGEAGAPGRDGRDGSKGDRGDVGSPGLQGPPGLPGPVGPPGQGFPGVAGSPGPKGDRGE
AGARGEQGLPGERGLKGESGSVTNIEQSLESLGLKVSALRQIVKDSSEGFLGISDRLRGY
KGEPGERGPMGKEGPVGLTGERGPKGDRGDMGPPGPPSHGLIERGPPGPPGQPGEPGKPG
IPGLPGRAGELGEAGRPGERGERGEKGERGEQGRDGLQGPPGPPGPKVDVDGTIPGVPGE
PGIPGLRGPKGEPGTDGDRGPKGDKGENGAKGDRGEVGEKGRDGSPGPSGERGPSGPEGK
PGPQGARGAPGPAGNHGDPGPHGAPGLAGPPGPQGPSGLKGEPGEPGPPARGLPGPPGAV
GLPGPPGSSGLVGPQGAPGLPGQVGETGKPGVTGRDGKDGERGAPGVPGPPGLSGPVGPK
GEPGAAGLPGQAVVGXPGMKGEKGAPGGLAGDLVGEPGSKGDRGLPGPRGEKGEAGQPGE
PGDPGEDGRKGAPGLRGEKGSMGTGIQGPPGSDGPPGLKGDSGPPGPPGPPGTPGVVGFP
GQAGPRGEPGQPGLAGERGLMGPSGKEGIPGPPGLPGQAGAAGPPGASGPKGDKGDPGVG
QPGARGERGDPGIRGENGRPGLEGDRGPAGPTGNRGERGDKGDAGAPGPKGDKGDTAVIE
GPPGLRGPKGETGDRGLRGLDGDKGARGDIGLPGEKGVKGELGDKGSPGSQGVRGPTGQK
GDTGDPGIPGASGLSGKDGAPGAHGGKGEPGFMGPRGPKGDRGLKGACGQDGDKGDKGEA
GLHGRPGLPGRKGEMGEMGLPGLLGHPGKEGLIGPKGDRGFDGQQGPKGDQGEKGERGAP
GVGGIHGPRGSDGAPGPPGPPGSIGPKGPEGIQGQKGERGPPGESVVGARGVPGIPGEQG
EQGSPGPMGPRGEKGEPSMTASDIRSFVRQEMSQHCACGGQFISSGSRPLPSYSADTPGP
GSWPHPIPVLRLSHAEEEGLGPPEDDEYSMEDYEDVEGDATEEPWAAGDGLCSLPMDEGS
CSNYTLRWYHRPGRGCQPFVFGGCEGNANRFSSREDCERQCLPHGGPGAPPAPQS
NT seq
8808 nt
NT seq
+upstream
nt +downstream
nt
atggacagctccaggatgaagccctggttcctgctcactgtcctcataggagtcctgttg
gtgtcagtgaaaggacagggggagagaggtcgaggcctgggaggagtgatctgcaccaac
ctctatgctgctgacatcgtcttcctgctggatggatcctcttccattggccgaaacaac
tttcgagaagtccgggccttcatggaggggctggtgcttcccttcactgaggtcgtaggg
ccttctggtgtccgcttcagtgtggtgcagtacagtgatgacccacggactgagtttggc
ctggatagctatggttctggtaatgaggtgatccaagcagttcgggagctcacctacaag
ggaggaaatactcgcactggggctggattccgacacgttgcagaccatatctttctgcct
cagctcgcccggcctgtccccaaggtctgcattctcatcactgatgggaagtctcaggac
caggtggaacccgcagctcagaggctgaagggacagggagtgaaggtgtttgcagtgggg
atcaagaatgctgatcagggagaacttcgacgggcagcttcggagccaccagatgtcttc
ttctacttcgtcaatgactttagcatcctcagcaccctgctgccccttgtgtcccgtcgt
gtctgcaccaccacgggaggcaccccccagatcctgcccccagagggcctcccctctggt
ccccgagatctggtgctatcacaggcaagcagtgaatccctcttggctgaatggacggca
gctagcggtcctgtcgtcagctacaaggtccagtatgtccctctcactgggctaggacag
cctgtgcccgaccagcggcaggaggtgactgtgccagcaagggagacgagagtccggctg
caaggtctgcggccacagactgaataccaggtgacagtggttgcccagtatgccaacagt
gttggggaggccgtgagtgggactgcccagaccgctgcactggaggggcccgtgatctcc
atccagaatgccacagcccacaccatccttgtggcctggcggccggtggctgaagccact
ggttaccgagtgacctggagaaatttagagagtgggtcttcccagcagctagacattggc
cggggccaatcatctgcccttctaaagggcctgagccctgacacagaatatgtggtgact
gtgacccctatacatggtcggatgccaggaccctcttcatcattgaaaacccgaacagcg
ctgggcatcattcagaacttacagacggtcatcttgggccccacatccatccaagtattc
tggacccacattcctgaggcccagggctacaggctggaatggagacgagtgagcggctca
gagccaacacaatcagtggtgctgtccacggatgtgaccagttaccagcttcaggggctg
cagccaggcaccgagtaccggctcacactctataccctatatgaggggcgtgaagttgct
acacctgctaccatctctcaaactgtgctggaacctgccctgggtcgagtgtctgattta
cgagtagctgaaacatccccatccaggcgagtggttagggtggtctggagctctgtgcct
ggggcctctggctaccgcttcgtggtacgcagcacacaagatggctctgagaagacacag
aggcttcctgctgaccagacaagctttgagttggacagagtccagcctggcgtgagctat
gtagtgcgtgtgtcggccctggcaggaagccgggaaggccctgctggcaccctcactgtt
cggcttgatcccgagtccttgcccagagtccccagacttcgagtggtagcatcagaaccc
ggccgggtccaggtgtcctggggtgcagtgcctggagttagtggttaccggctaagctgg
cggctgagagatggccaggagtcttccaggaccctgccagcagacaccacttcctttgac
attgggggtctgcggccaggcgccacataccaggtttcagtttctgccctacggggtgca
gaccggggtcccccctcagtcatcactctcctcacagactctccaggatctgtggctggt
cttcgtgtgactcatgctgggagctcatctgtcaggatcacctggacgggcgttccagga
gccacaagctataggatctcttggcactcaggcagagggccagaacagtctcagctagtc
cctggggaagcttcaacagccaaactcgatgggctcgagccaaacacagactacacagtg
agagtaacagccttggtgggcagcttggaaggggcagctgcttctgtggctgtgaggacc
gccccagagcccgtgggtgctgtgtccaggctacagatccttgactcatccagtgatgtt
gtccgagtcacctgggtaggagtccctggtgccacatcctacaggctggtgtggggaaga
agagacggcggcccagagagtagccggatgctcccgggagacacagactctgctgagatt
ggcggcctggagggaggcatcagttacacggtccgagtgactgctctgatagggaaccgc
gagggggcgcccgtgagcctcatagtgactacaccacctgtggcccctgctgctcctggc
tcacttaggctcctgcagagtgaggagcgggcgctgcgcctggcttgggaccctgtgcct
ggggccggcgggttccggctccgctggcggcccgaaggtggcccagagcagtccagggtc
ctgggcccagaagtcagccgctatgacctgctagggctggagccagggacactgtactat
gtaaccctgagcaccttgggtccttctggatcaggggagagcccaccacggaccctatct
gcccgaactggggttccctccctcctcaccactgaccttcgtgttgtggagacctcagtg
gattcggtgacgttggcctggacgcaggtgccagggacatccagctacatcctgtcttgg
agaccacttccaggctctggctacactggccctggctcccagcagacacttccaggctcc
ttgagctcccagagagtgtcagggctggaacctggcgtctcctacaccttttccttaaca
cctgtccaagggagtagccgaggtcctgaggtttcacttactcagcatcctgggtgtgcg
aacggccaggcagatgttgtgttcctgatccatgccaccagggacaatgagcatcgctca
ggtattgtgaagtctgccctcagccgcctggtgtctgccctggggccacttggaccagat
gctatgcaggttgggcttatgacctacagtcatcgaccctccccgctggtccccctgaat
ggctcctatgatcgaaacgccatccttcagcggatccaggacatcccctacacagatcca
agtgggaacaaccttggggttgccatcaacacagctcataggtacctgttggcccctggc
agcagtgggcggcgctcccgtgtgccaggcttgctggtgctggtggcggacggtccttct
ggggatgacgtcatcagtcctgctcgagaggctcaggctgcagggatctccgtgtttgca
ctgggtattcctggcgctcaaccggagcagctgcggcgtctggtgtccggtacggagcct
gccccggtctttattgctgtggacaatgcccgtggcctggagcaggcagttggtggcctg
gccactgctctttgccaggtggcctctggcacccagctgaggcctgtgccctgcccagcg
cagtgtccgaggggccagaaaggagaacctggacaaactggccagaaaggacaaattggc
ccccctggagaaccgggcaggagtggcccccctggacctcgggggttacctggaggtggc
gagaagggggagagggggttccctggagtggatgggcaaccaggtagccctggtaaccct
ggaagtcctggtctgacaggctctcctggccgacctggccctcgaggggaagcgggggaa
ccaggcctgcctggacagaagggggagccggggaggcctgggtctgttataggaggagga
gcagggcagccaggcaggaaaggggagccaggtgtccagggacctccaggcctccggggc
tcagatgggaacccaggcctgccagggccccgaggagcatcgataaagggtgacaagggt
gagagaggagagccgggtcttcctggagcaggtcaaggtgctggagggggcgatccaggg
ctgccaggccttccaggaaatccaggtcctgtgggtccccgtggcccccctggggagaaa
ggagacaagggtgcaggcgaagatggatttccagggctcccaggtcgaccagggaacccg
ggagacagaggtcctcgaggaccaccaggagaacctggaagcaaaggagacccaggccag
ccaggatcttcaggggaagttggagagaagggtgatcgaggccccccaggtccaccagga
ctgcagggggagcctggcttgtcagggagacctggggctgaaggccaagaaggaccacca
ggatcagctggtcgaagaggagagaagggagaacctggagagcctggcaaacctggggag
atcgtgggattcgatactgctggagtaaaaggagagaaggggaatctggggccagaggga
cccaggggagccccaggacccaaaggggatcggggttcacctggagttggtattcctggg
gatcctggccccaaaggggagcttggagagcgaggtgccattggcctcacaggcagagct
gggcccaagggtgatgttggggcttctggagagaaaggggagcctggaagagcagggtcc
ccaggacccattggccctcgagggagagatggtgaacctggagagaagggagatgagggt
cctatgggggagacaggtctgcctggaaagcctggggaccggggtcttcgggggctccca
ggcactcggggcacaccaggtgagaagggagaccaaggtgatcctggagaagatggacga
aatggcagtccaggaccaatgggtttcaaaggtgaacgtggagaaccggggccaccagga
ccccctgggagattggcagatccagggactggaattcctggggttggagagaaaggaata
aagggggagcctggtgatcccggagaagatgggcctcggggccccaagggtgatgctgga
ctcccaggagctcctggggagaggggggctgaaggtttgcgaggtccccctggagcccgg
ggagattcaggagaccggggccctgctggggagaagggtgagcggggaacccctgggtct
gatggtcggaatggactggatgggaagccaggagcaataggaccccctggcctgaggggt
gacagtggaaaaactggggagcctggaagagatggacttcctggcctgcgaggagaacag
ggaccccctggaccgcctggtcttcctggagtgactgggaagcctggagatgatggcaaa
ccagggctgaatggaaaaaatggagaacctggggaccctggagaagacgggaggaagggt
gacaagggtgaagccggagcccctggaagagacggtcgggatggttccaaaggtgatcgt
ggggatgtaggaagcccaggactacaaggtccccctggactccctggcccagttggcccc
ccaggacagggttttccaggtgttgctgggagtccagggcccaagggtgaccgaggagaa
gcaggagccagaggtgaacagggactccctggagagcgtggcttgaaaggggaatcagga
tctgtgacaaacatagaacaatccctggagtcccttggcctcaaggtgtctgcacttcga
caaattgtgaaagatagctcagagggcttccttggcatctctgaccgactccgaggctac
aaaggggagcctggagagcgtgggccaatgggcaaggaggggcctgttggcttgaccgga
gagcgaggcccaaagggggacagaggagacatgggtcccccgggacctccaagccatggt
cttatagagagggggccccctggtccccctggtcagcctggggagccaggcaaacctggt
atccctgggctcccaggccgagcaggagagctgggtgaggctggacgaccaggggagagg
ggtgagcgtggagagaagggggagcgtggtgaacagggcagagatgggttacaaggtcct
cctggaccccctgggccaaaggttgatgtggatgggacaattcctggagtccctggagag
cctggcatccctgggctcaggggacctaagggtgagccaggcacagatggtgatcgaggc
cccaaaggagacaagggagaaaatggagccaagggtgaccgtggagaggtcggagagaag
ggccgagatggcagcccgggtccttctggagagcggggaccatcagggccagaaggaaag
ccgggtcctcagggtgcaagaggagccccaggcccagcaggcaaccacggggacccagga
ccacatggtgccccaggacttgctggtcccccaggaccccagggtccatctggcttgaag
ggggagcctggtgagcctggaccacctgcgcggggcctgcctggccccccaggagccgtg
ggtctgcctggccccccaggttcctctggccttgtgggcccacaaggggcaccaggttta
ccaggccaagtgggggagacagggaagcctggagtgacaggccgggatggcaaagatgga
gaaaggggagctcctggggtccccgggccgcctggcctgtctggccctgttggacccaag
ggggagcctggagctgcaggactcccgggacaggctgtggtcgggncccctggtatgaag
ggtgagaagggagcccctggaggcctcgctggggacctagtgggagaacctggatccaaa
ggggacagaggacttcctgggcctcggggagagaagggtgaggccggacagcctggggaa
cctggcgatccaggagaggatggccggaaaggggcaccaggactcagaggtgaaaagggc
tccatggggactgggatccagggcccccctggatcagatgggcccccaggcctgaaggga
gactcaggccctccaggtcctccgggacccccaggaacaccaggcgttgtgggattccct
ggccaggcaggccccagaggagaacctgggcagccgggccttgctggagagaggggtttg
atggggccttctgggaaagaagggatcccagggcctcctgggctcccaggacaagctgga
gcagcaggaccacccggggcctctggacccaaaggagacaagggagatcctggagtgggg
cagccaggcgcccgaggagagagaggggatccaggcatccggggtgaaaatggccgtcct
ggtctggagggagacagaggccccgcgggccctacagggaatcggggggagcgaggggac
aagggtgatgcaggagcccctggaccgaagggtgacaagggtgatacagctgtgatcgag
gggcctcctgggctccgaggccccaagggagagacaggtgaccgaggcctgagaggctta
gatggtgacaaaggagccagaggggacattggccttcctggggaaaagggtgtgaaggga
gaactgggagacaaaggctctcctggttcccagggggttcgaggccccacagggcagaag
ggcgacactggtgacccagggatccccggggcatcgggcctctctgggaaagatggtgct
cctggtgcccatggagggaagggagagccaggctttatgggcccccgaggtcccaaggga
gatcggggcctgaaaggggcctgtggccaagatggggacaagggggacaagggggaagca
ggtctccatgggcggcctggacttcctggacggaaaggagagatgggggagatggggctg
ccaggcctgttggggcacccaggaaaggagggtttgattggccctaagggtgaccgaggc
tttgatggtcagcaaggacccaagggtgaccagggtgaaaaaggggagcggggggctcct
ggtgttggggggatccatggcccccggggcagtgatggagctcctggaccccctggacct
ccaggcagcatcggccccaaaggtcccgagggcattcaggggcaaaagggggagaggggt
ccccctggtgagagtgtggttggtgcccgaggggtccctggaatcccaggagagcaaggg
gagcagggaagcccaggtcccatgggcccccgaggagagaagggggagccatctatgacg
gcatctgacatccggagcttcgtccgacaagagatgagtcagcattgtgcctgtgggggt
cagttcatctcctcaggatcaagaccccttcccagttattctgcagataccccaggccct
ggctcctggccccacccaatacctgtgctgaggctctcccatgctgaagaggaagggctg
gggcctccagaagatgatgagtactccatggaggattatgaagacgtggagggtgacgct
actgaggagccttgggctgctggtgatggtttgtgctctctgccaatggatgaaggctct
tgctccaattacaccctacgatggtatcaccgcccaggcaggggctgtcaaccctttgta
tttggtggctgtgagggcaatgccaaccgcttcagttcccgtgaggactgtgaacgacaa
tgtctaccccatggaggcccaggtgctccccctgctccccagagttga
DBGET
integrated database retrieval system
