Phascolarctos cinereus (koala): 110217565
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Entry
110217565 CDS
T05867
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04151
PI3K-Akt signaling pathway
pcw04510
Focal adhesion
pcw04512
ECM-receptor interaction
pcw04611
Platelet activation
pcw04820
Cytoskeleton in muscle cells
pcw04926
Relaxin signaling pathway
pcw04933
AGE-RAGE signaling pathway in diabetic complications
pcw04974
Protein digestion and absorption
pcw05146
Amoebiasis
pcw05165
Human papillomavirus infection
pcw05205
Proteoglycans in cancer
pcw05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110217565 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110217565 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110217565 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110217565 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
110217565 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
110217565 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
110217565 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
110217565 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110217565 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
110217565 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
110217565 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
110217565 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110217565 (COL1A2)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110217565 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
110217565
NCBI-ProteinID:
XP_020855640
UniProt:
A0A6P5LBH9
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MLSFADARLWLLLAATWCLAAAQAGQETPKGRRGPQGDRGPRGQRGPPGPPGRDGEDGPP
GPPGPPGPPGLGGNFAAQYDPSKGLDMGPGPMGLMGPRGPPGASGPPGAQGFQGPAGEPG
EPGQTGPAGARGPPGPPGKSGEDGHPGKPGRPGERGIVGPQGARGFPGTPGLPGFKGIRG
HNGLDGLKGQAGAPGVKGEPGAPGENGTPGQAGARGLPGERGRIGGAGPTGARGSDGSVG
PVGPAGPLGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGELGLPGMTGPVGPAGNPG
ANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPAGAAGASGPRGLAGEPGPAGSKGESGNKG
EPGSAGPQGPPGPHGEEGKRGPNGEPGSTGPPGPPGLRGVPGSRGLPGADGRAGGMGPPG
NRGPSGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNAGPTGKEGPAGLPGADGRPGPTG
PAGNRGEPGNIGFPGPKGPNGDPGKSGDKGHAGLAGARGAPGPDGNNGAQGPPGPAGVQG
GKGEQGPAGPPGFQGLPGPSGPAGEGGKVGERGVAGEFGLPGPAGPRGERGPPGESGAVG
PTGSIGSRGASGPPGPDGNKGEPGVVGAPGSAGPAGSGGVPGERGAAGVPGGKGEKGETG
PRGDFGNPGRDGARGAPGAMGAPGPAGATGERGEAGPAGPAGPTGARGAPGDRGEAGPAG
PNGFAGPPGAAGQAGAKGERGTKGPKGENGAVGPTGPVGAAGPSGPSGPPGPVGGRGDGG
PPGATGFPGAAGRTGAPGPAGITGPPGPPGAAGKEGPRGPRGDQGPLGRAGETGAVGPPG
FAGEKGPPGESGATGPPGSSGPQGLLGAPGILGLPGSRGERGLPGVSGALGEPGPLGIAG
PPGARGPPGAVGNPGVNGAPGEAGRDGNPGNDGPPGRDGLAGHKGERGYPGNPGAVGNAG
APGPHGAVGPAGKPGNRGEPGPAGSVGPVGPFGARGPSGPQGPRGDKGEPGDKGPRGLNG
FKGHNGFQGLPGISGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRPGHAGAVGPAGLRG
SQGSQGPAGPPGPPGLPGPPGPSGGGYDFGYEGDFYRADQPRTQPSLRPKDYEVDATLKS
LNNQIETILSPEGSKKNPARTCRDLRLSHPEWSSGFYWIDPNQGCTMDAIKVFCNFSTGE
TCIRAQPENIPAKAWYNNRNPQVKKHVWFGETFNGGTQFEYNTEGITSKDMATQLAFMRL
LANHASQNITYHCKNSVAYMDAESGSLKKAVILQGSNDVELTAEGNSRFTFTVLEDGCSR
KTNEWGKTVIEYKTNKPSRLPFLDIALLDIGDAHQAFRVDIGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgcggacgcgcgcctctggctgctgctcgcggccacttggtgcctggcc
gcagctcaggctggacaggagacacccaaaggaagaaggggaccacaaggagacagaggt
ccacgaggtcaaaggggtcccccaggtcccccaggcagagatggtgaagatggtccccca
ggccctccagggccccctggtcctcctggccttggagggaacttcgcagcccagtatgat
cctagcaaaggattggacatgggcccaggaccaatgggtttgatgggacccagaggcccc
cctggtgcaagtggaccacctggtgcccaaggcttccaaggacccgctggtgagcccgga
gagcctggtcaaactggccctgcaggtgcccgaggaccccctggaccccctggaaagtct
ggtgaagatggtcaccctgggaagcctggaaggcctggtgagagaggcattgttggacca
cagggcgctcgtggcttccccgggactcctggcctgcctggattcaagggaattcggggg
cacaatggtcttgatggactgaaaggacaagctggagctcccggtgtcaagggtgaacct
ggtgcccctggtgagaatggcacccctggccaagcaggagcccgaggcctcccaggagag
agaggacgtattggaggtgctggccccacgggagcccgtggaagtgatggtagcgttggc
cctgttggacctgccggtcccctcggctctgctggtccccccggcttcccaggtgcccct
ggtcccaagggagaactcggccctgtcggcaaccctggccctgctggccctgctggtcct
cgtggggagctgggtcttccaggcatgactggccctgttggtcccgcgggaaaccctggt
gccaatggtctcacaggagccaagggggctgcgggtctccctggtgtcgctggtgctcct
ggtctgcctggtcctcgtggcatcccgggccctgctggtgctgctggtgcctctggtccc
agagggcttgcgggtgaacctggtcctgctggttccaaaggagaaagtggaaacaagggg
gagccgggctccgctgggccccaaggccctcctggcccccatggtgaagaaggcaagaga
ggacccaatggcgaaccagggtccaccggccccccaggacccccaggactcagaggggtt
cctggatcccggggtcttcctggagctgatggccgagctggtggcatgggtccccctggt
aaccgaggcccctctggtcctgctggagtcagaggccccaacggagatgctggaagacct
ggcgagcctggtctcatgggccccagaggtctccctggctcccctggaaatgctggcccc
actggtaaagaaggccctgccggtcttcctggtgctgatggcagacccggccccacaggt
cctgctgggaatagaggtgaacctggtaacattggcttcccaggacccaaaggccctaat
ggcgatcctggcaaaagtggggacaaaggtcacgctggtcttgctggtgctcggggagct
cctggccctgatgggaacaacggtgctcagggaccccctggccctgctggtgtccaaggt
ggaaaaggtgaacagggacccgctggtcctccaggcttccagggtctgcctggcccctca
ggccctgctggtgaaggtggcaaagtaggagaaaggggtgtcgctggtgaatttggcctc
cccggcccggctggcccaagaggtgagcgtggtccccctggagaaagtggagctgtcggt
cctacaggttccatcggaagccgaggtgcatctggccccccgggtcctgatggcaacaag
ggtgagcctggtgtcgttggtgcccctggaagtgctggccccgcaggctctgggggagta
ccaggagagcgaggtgctgctggcgtccctggaggcaaaggagagaagggtgaaactggc
cccagaggtgacttcggtaacccaggcagagacggcgctcggggagcacctggagcaatg
ggtgccccagggcctgctggggccacaggcgagaggggtgaagctggccctgctggtcct
gccggccccactggtgcccgcggtgctcctggtgatcgtggagaggctggccccgctggc
cccaatggctttgctggccctcctggcgctgctggccaagctggagccaagggagaacgc
ggaaccaaaggaccaaagggagaaaatggtgctgttggccctactggccctgtgggggca
gctggcccttcgggtcccagtggcccccctggtcctgtcggaggtcgtggtgatggtggc
ccccctggtgcaactggtttccctggtgctgctggaagaactggagcccctggccctgct
ggtatcactggtcctcctggtccccctggtgctgctggaaaagaaggccctcgtggtcct
cggggtgaccaaggtccccttggccgggctggagagacaggtgctgttggcccccctggc
ttcgctggagagaagggtccccccggagagtccggcgctaccggccctcctggctcctca
ggtcctcaagggcttcttggcgctcctggaatccttggtctgcctggctcaagaggagag
cgtggtcttcctggggtctctggagccctgggtgagcctggtcctcttggcatcgctggt
cctccaggcgctcgaggtccccctggtgccgtgggtaaccctggcgtcaatggtgctcct
ggtgaagctggtcgtgatggcaaccctggcaatgatggtcccccgggccgagacggtctc
gctggtcacaagggagagcgcggctaccctggtaatcctggtgctgttggtaacgctggc
gctcctggccctcatggtgctgtgggtcctgctggcaagcctggaaaccgcggggagccg
ggtcccgctggttcagtcggtcctgttggccccttcggtgcaagaggtcctagcggtccc
caaggtccccgaggtgacaagggagaacctggtgacaagggtcccagaggcttgaatggt
ttcaaaggacacaatggattccaaggccttcctggcatatctggccaacatggtgaccaa
ggtgctcctggttcagttggccctgccggccccaggggtcctgctggtccttctggccct
gctggtaaagatggtcgccctggacatgcaggtgctgttgggcctgctggtctccgtggt
tctcaaggcagtcaaggccccgctggtcctcctggtccccctggcctgcctggtccccct
ggcccaagcggcggtggctatgactttggttatgaaggtgatttctaccgggctgaccag
cctcgcactcagccttccctcagacctaaggactatgaagtggatgctactctgaaatcc
ctcaacaaccaaattgagaccatcctcagcccagaaggttccaagaagaaccctgctcgt
acctgccgagacctgagactcagccacccagaatggagcagtggattctactggattgac
cccaaccagggctgcaccatggatgccatcaaagtgttctgcaacttctccactggcgag
acctgcatccgagcccagcctgagaacatccctgccaaggcctggtacaataacagaaat
ccccaggtcaagaagcacgtgtggtttggagagacgtttaatggtggcactcagtttgaa
tacaacacagaaggtataacctcaaaggatatggctacccagctggccttcatgcgcctg
ctggccaaccacgcctctcagaacatcacctaccactgcaagaacagcgtggcctacatg
gatgctgagagtggctctctgaagaaggcagtcatcctgcagggttccaatgatgtggag
ctcacagctgaaggcaacagccggttcacgttcactgtgctggaggatggctgctccaga
aagaccaatgagtggggaaagactgtcattgagtacaagaccaacaaaccctctcgcctg
cccttcctcgacatcgcgcttttggacattggtgacgcacaccaagcattccgtgtggac
attggcccagtctgtttcaaatga
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